SCOP 1.73: Protein: Nucleoside 2-deoxyribosyltransferase

Lineage for Protein: Nucleoside 2-deoxyribosyltransferase

Root: SCOP 1.73
Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
Superfamily c.23.14: N-(deoxy)ribosyltransferase-like [52309] (3 families)
there are similar active site architectures as well as the catalytic mechanisms of functionally characterised members
Family c.23.14.1: N-deoxyribosyltransferase [52310] (2 proteins)
Protein Nucleoside 2-deoxyribosyltransferase [52311] (2 species)
class II N-deoxyribosyltransferase

Species:

Lactobacillus leichmannii [TaxId:28039] [52312] (2 PDB entries)
1. Domains for 1f8x:
  1. Domain d1f8xa_: 1f8x A: [31397]
  2. Domain d1f8xb_: 1f8x B: [31398]
2. Domains for 1f8y:
  1. Domain d1f8ya_: 1f8y A: [31395]
  2. Domain d1f8yb_: 1f8y B: [31396]
    complexed with 5-methyl-2'-deoxypseudouridine
    complexed with 5md
Trypanosoma brucei [TaxId:5691] [142064] (5 PDB entries)
1. Domains for 2a0k:
  1. Domain d2a0ka1: 2a0k A:9-160 [125954]
    complexed with gol, so4
  2. Domain d2a0kb1: 2a0k B:9-160 [125955]
    automatically matched to 2A0K A:9-160
    complexed with gol, so4
2. Domains for 2f2t:
  1. Domain d2f2ta1: 2f2t A:9-160 [132847]
    automatically matched to 2A0K A:9-160
    complexed with 5iq, gol, so4; mutant
  2. Domain d2f2tb1: 2f2t B:9-160 [132848]
    automatically matched to 2A0K A:9-160
    complexed with 5iq, gol, so4; mutant
3. Domains for 2f62:
  1. Domain d2f62a1: 2f62 A:9-160 [133021]
    automatically matched to 2A0K A:9-160
    complexed with 12m, gol, so4
  2. Domain d2f62b1: 2f62 B:9-160 [133022]
    automatically matched to 2A0K A:9-160
    complexed with 12m, gol, so4
4. Domains for 2f64:
  1. Domain d2f64a1: 2f64 A:9-160 [133024]
    automatically matched to 2A0K A:9-160
    complexed with 12q, gol, so4
  2. Domain d2f64b1: 2f64 B:9-160 [133025]
    automatically matched to 2A0K A:9-160
    complexed with 12q, gol, so4
5. Domains for 2f67:
  1. Domain d2f67a1: 2f67 A:9-160 [133033]
    automatically matched to 2A0K A:9-160
    complexed with 12b, gol, so4
  2. Domain d2f67b1: 2f67 B:9-160 [133034]
    automatically matched to 2A0K A:9-160
    complexed with 12b, gol, so4

More info for Protein Nucleoside 2-deoxyribosyltransferase from c.23.14.1: N-deoxyribosyltransferase

Timeline for Protein Nucleoside 2-deoxyribosyltransferase from c.23.14.1: N-deoxyribosyltransferase:

Protein Nucleoside 2-deoxyribosyltransferase from c.23.14.1: N-deoxyribosyltransferase first appeared (with stable ids) in SCOP 1.55, called Protein Nucleoside 2-deoxyribosyltransferase from c.23.14.1: Nucleoside 2-deoxyribosyltransferase
Protein Nucleoside 2-deoxyribosyltransferase from c.23.14.1: N-deoxyribosyltransferase appears in SCOP 1.71
Protein Nucleoside 2-deoxyribosyltransferase from c.23.14.1: N-deoxyribosyltransferase appears in SCOP 1.75
Protein Nucleoside 2-deoxyribosyltransferase from c.23.14.1: N-deoxyribosyltransferase appears in the current release, SCOPe 2.08