Lineage for Protein: Nucleoside 2-deoxyribosyltransferase

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2438294Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. 2440985Superfamily c.23.14: N-(deoxy)ribosyltransferase-like [52309] (4 families) (S)
    there are similar active site architectures as well as the catalytic mechanisms of functionally characterised members
  5. 2440986Family c.23.14.1: N-deoxyribosyltransferase [52310] (2 proteins)
  6. 2440987Protein Nucleoside 2-deoxyribosyltransferase [52311] (2 species)
    class II N-deoxyribosyltransferase

Species:

  1. 2440988Lactobacillus leichmannii [TaxId:28039] [52312] (2 PDB entries)
    1. Domains for 1f8x:
      1. 2440991Domain d1f8xa_: 1f8x A: [31397]
      2. 2440992Domain d1f8xb_: 1f8x B: [31398]
    2. Domains for 1f8y:
      1. 2440989Domain d1f8ya_: 1f8y A: [31395]
        complexed with 5-methyl-2'-deoxypseudouridine
        complexed with 5md
      2. 2440990Domain d1f8yb_: 1f8y B: [31396]
        complexed with 5-methyl-2'-deoxypseudouridine
        complexed with 5md
  2. 2440993Trypanosome (Trypanosoma brucei) [TaxId:5691] [142064] (5 PDB entries)
    Uniprot Q57VC7 1-152
    1. Domains for 2a0k:
      1. 2441002Domain d2a0ka1: 2a0k A:9-160 [125954]
        Other proteins in same PDB: d2a0ka2, d2a0kb3
        complexed with gol, so4
      2. 2441003Domain d2a0kb2: 2a0k B:9-160 [125955]
        Other proteins in same PDB: d2a0ka2, d2a0kb3
        automated match to d2a0ka1
        complexed with gol, so4
    2. Domains for 2f2t:
      1. 2441000Domain d2f2ta2: 2f2t A:9-160 [132847]
        Other proteins in same PDB: d2f2ta3, d2f2tb3
        automated match to d2a0ka1
        complexed with 5iq, gol, so4
      2. 2441001Domain d2f2tb2: 2f2t B:9-160 [132848]
        Other proteins in same PDB: d2f2ta3, d2f2tb3
        automated match to d2a0ka1
        complexed with 5iq, gol, so4
    3. Domains for 2f62:
      1. 2440994Domain d2f62a2: 2f62 A:9-160 [133021]
        Other proteins in same PDB: d2f62a3, d2f62b3
        automated match to d2a0ka1
        complexed with 12m, gol, so4
      2. 2440995Domain d2f62b2: 2f62 B:9-160 [133022]
        Other proteins in same PDB: d2f62a3, d2f62b3
        automated match to d2a0ka1
        complexed with 12m, gol, so4
    4. Domains for 2f64:
      1. 2440996Domain d2f64a2: 2f64 A:9-160 [133024]
        Other proteins in same PDB: d2f64a3, d2f64b3
        automated match to d2a0ka1
        complexed with 12q, gol, so4
      2. 2440997Domain d2f64b2: 2f64 B:9-160 [133025]
        Other proteins in same PDB: d2f64a3, d2f64b3
        automated match to d2a0ka1
        complexed with 12q, gol, so4
    5. Domains for 2f67:
      1. 2440998Domain d2f67a2: 2f67 A:9-160 [133033]
        Other proteins in same PDB: d2f67a3, d2f67b3
        automated match to d2a0ka1
        complexed with 12b, gol, so4
      2. 2440999Domain d2f67b2: 2f67 B:9-160 [133034]
        Other proteins in same PDB: d2f67a3, d2f67b3
        automated match to d2a0ka1
        complexed with 12b, gol, so4

More info for Protein Nucleoside 2-deoxyribosyltransferase from c.23.14.1: N-deoxyribosyltransferase

Timeline for Protein Nucleoside 2-deoxyribosyltransferase from c.23.14.1: N-deoxyribosyltransferase: