SCOP 1.63: Protein: Methylmalonyl-CoA mutase C-terminal domains of alpha and beta subunits

Lineage for Protein: Methylmalonyl-CoA mutase C-terminal domains of alpha and beta subunits

Root: SCOP 1.63
Class c: Alpha and beta proteins (a/b) [51349] (117 folds)
Fold c.23: Flavodoxin-like [52171] (16 superfamilies)
3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
Superfamily c.23.6: Cobalamin (vitamin B12)-binding domain [52242] (1 family)
Family c.23.6.1: Cobalamin (vitamin B12)-binding domain [52243] (3 proteins)
Protein Methylmalonyl-CoA mutase C-terminal domains of alpha and beta subunits [52249] (1 species)
Both subunits are clearly related but only one (alpha) is active and binds B12

Species:

Propionibacterium freudenreichii, subsp. shermanii [TaxId:1744] [52250] (8 PDB entries)
1. Domains for 1e1c:
  1. Domain d1e1ca2: 1e1c A:561-728 [31263]
    Other proteins in same PDB: d1e1ca1, d1e1cb1, d1e1cc1, d1e1cd1
  2. Domain d1e1cb2: 1e1c B:476-638 [31264]
    Other proteins in same PDB: d1e1ca1, d1e1cb1, d1e1cc1, d1e1cd1
  3. Domain d1e1cc2: 1e1c C:561-728 [31265]
    Other proteins in same PDB: d1e1ca1, d1e1cb1, d1e1cc1, d1e1cd1
  4. Domain d1e1cd2: 1e1c D:476-638 [31266]
    Other proteins in same PDB: d1e1ca1, d1e1cb1, d1e1cc1, d1e1cd1
    complexed with b12, dca; mutant
2. Domains for 1req:
  1. Domain d1reqa2: 1req A:561-728 [31247]
    Other proteins in same PDB: d1reqa1, d1reqb1, d1reqc1, d1reqd1
  2. Domain d1reqb2: 1req B:476-638 [31248]
    Other proteins in same PDB: d1reqa1, d1reqb1, d1reqc1, d1reqd1
  3. Domain d1reqc2: 1req C:561-728 [31249]
    Other proteins in same PDB: d1reqa1, d1reqb1, d1reqc1, d1reqd1
  4. Domain d1reqd2: 1req D:476-638 [31250]
    Other proteins in same PDB: d1reqa1, d1reqb1, d1reqc1, d1reqd1
    complexed with b12, dca, gol; mutant
3. Domains for 2req:
  1. Domain d2reqa2: 2req A:561-728 [31267]
    Other proteins in same PDB: d2reqa1, d2reqb1, d2reqc1, d2reqd1
  2. Domain d2reqb2: 2req B:476-637 [31268]
    Other proteins in same PDB: d2reqa1, d2reqb1, d2reqc1, d2reqd1
  3. Domain d2reqc2: 2req C:561-728 [31269]
    Other proteins in same PDB: d2reqa1, d2reqb1, d2reqc1, d2reqd1
  4. Domain d2reqd2: 2req D:476-637 [31270]
    Other proteins in same PDB: d2reqa1, d2reqb1, d2reqc1, d2reqd1
    complexed with b12, coa; mutant
4. Domains for 3req:
  1. Domain d3reqa2: 3req A:561-728 [31271]
    Other proteins in same PDB: d3reqa1, d3reqb1
  2. Domain d3reqb2: 3req B:476-637 [31272]
    Other proteins in same PDB: d3reqa1, d3reqb1
    complexed with aco; mutant
5. Domains for 4req:
  1. Domain d4reqa2: 4req A:561-728 [31255]
    Other proteins in same PDB: d4reqa1, d4reqb1, d4reqc1, d4reqd1
  2. Domain d4reqb2: 4req B:476-638 [31256]
    Other proteins in same PDB: d4reqa1, d4reqb1, d4reqc1, d4reqd1
  3. Domain d4reqc2: 4req C:561-728 [31257]
    Other proteins in same PDB: d4reqa1, d4reqb1, d4reqc1, d4reqd1
  4. Domain d4reqd2: 4req D:476-638 [31258]
    Other proteins in same PDB: d4reqa1, d4reqb1, d4reqc1, d4reqd1
    complexed with 5ad, b12, gol, mca, sca; mutant
6. Domains for 5req:
  1. Domain d5reqa2: 5req A:561-728 [31259]
    Other proteins in same PDB: d5reqa1, d5reqb1, d5reqc1, d5reqd1
  2. Domain d5reqb2: 5req B:476-638 [31260]
    Other proteins in same PDB: d5reqa1, d5reqb1, d5reqc1, d5reqd1
  3. Domain d5reqc2: 5req C:561-728 [31261]
    Other proteins in same PDB: d5reqa1, d5reqb1, d5reqc1, d5reqd1
  4. Domain d5reqd2: 5req D:476-638 [31262]
    Other proteins in same PDB: d5reqa1, d5reqb1, d5reqc1, d5reqd1
    complexed with b12, gol, mcd, scd; mutant
7. Domains for 6req:
  1. Domain d6reqa2: 6req A:561-728 [31251]
    Other proteins in same PDB: d6reqa1, d6reqb1, d6reqc1, d6reqd1
  2. Domain d6reqb2: 6req B:476-638 [31252]
    Other proteins in same PDB: d6reqa1, d6reqb1, d6reqc1, d6reqd1
  3. Domain d6reqc2: 6req C:561-728 [31253]
    Other proteins in same PDB: d6reqa1, d6reqb1, d6reqc1, d6reqd1
  4. Domain d6reqd2: 6req D:476-638 [31254]
    Other proteins in same PDB: d6reqa1, d6reqb1, d6reqc1, d6reqd1
    complexed with 3cp, b12, gol; mutant
8. Domains for 7req:
  1. Domain d7reqa2: 7req A:561-728 [31243]
    Other proteins in same PDB: d7reqa1, d7reqb1, d7reqc1, d7reqd1
  2. Domain d7reqb2: 7req B:476-638 [31244]
    Other proteins in same PDB: d7reqa1, d7reqb1, d7reqc1, d7reqd1
  3. Domain d7reqc2: 7req C:561-728 [31245]
    Other proteins in same PDB: d7reqa1, d7reqb1, d7reqc1, d7reqd1
  4. Domain d7reqd2: 7req D:476-638 [31246]
    Other proteins in same PDB: d7reqa1, d7reqb1, d7reqc1, d7reqd1
    complexed with 2cp, b12, gol; mutant

More info for Protein Methylmalonyl-CoA mutase C-terminal domains of alpha and beta subunits from c.23.6.1: Cobalamin (vitamin B12)-binding domain

Timeline for Protein Methylmalonyl-CoA mutase C-terminal domains of alpha and beta subunits from c.23.6.1: Cobalamin (vitamin B12)-binding domain:

Protein Methylmalonyl-CoA mutase C-terminal domains of alpha and beta subunits from c.23.6.1: Cobalamin (vitamin B12)-binding domain first appeared (with stable ids) in SCOP 1.55
Protein Methylmalonyl-CoA mutase C-terminal domains of alpha and beta subunits from c.23.6.1: Cobalamin (vitamin B12)-binding domain appears in SCOP 1.61
Protein Methylmalonyl-CoA mutase C-terminal domains of alpha and beta subunits from c.23.6.1: Cobalamin (vitamin B12)-binding domain does not appear in SCOP 1.65