SCOPe 2.06: Protein: Succinyl-CoA synthetase, alpha-chain, C-terminal domain

Lineage for Protein: Succinyl-CoA synthetase, alpha-chain, C-terminal domain

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
Superfamily c.23.4: Succinyl-CoA synthetase domains [52210] (2 families)
Family c.23.4.1: Succinyl-CoA synthetase domains [52211] (3 proteins)
contain additional N-terminal strand "0", antiparallel to strand 2
Protein Succinyl-CoA synthetase, alpha-chain, C-terminal domain [52212] (5 species)

Species:

Aeropyrum pernix [TaxId:272557] [225352] (1 PDB entry)
- Domain for 2yv2:
  - Domain d2yv2a2: 2yv2 A:129-295 [207721]
    Other proteins in same PDB: d2yv2a1
    automated match to d1euda2

Escherichia coli [TaxId:562] [52213] (11 PDB entries)

Domains for 1cqi:
1. Domain d1cqia2: 1cqi A:122-286 [31137]
  Other proteins in same PDB: d1cqia1, d1cqib1, d1cqib2, d1cqid1, d1cqie1, d1cqie2
  complexed with adp, coa, mg, po4
2. Domain d1cqid2: 1cqi D:122-286 [31138]
  Other proteins in same PDB: d1cqia1, d1cqib1, d1cqib2, d1cqid1, d1cqie1, d1cqie2
  complexed with adp, coa, mg, po4
Domains for 1cqj:
1. Domain d1cqja2: 1cqj A:122-286 [31133]
  Other proteins in same PDB: d1cqja1, d1cqjb1, d1cqjb2, d1cqjd1, d1cqje1, d1cqje2
  complexed with coa, po4
2. Domain d1cqjd2: 1cqj D:122-286 [31134]
  Other proteins in same PDB: d1cqja1, d1cqjb1, d1cqjb2, d1cqjd1, d1cqje1, d1cqje2
  complexed with coa, po4
Domains for 1jkj:
1. Domain d1jkja2: 1jkj A:122-287 [66801]
  Other proteins in same PDB: d1jkja1, d1jkjb1, d1jkjb2, d1jkjd1, d1jkje1, d1jkje2
  complexed with coa, gol, po4, so4
2. Domain d1jkjd2: 1jkj D:122-287 [66805]
  Other proteins in same PDB: d1jkja1, d1jkjb1, d1jkjb2, d1jkjd1, d1jkje1, d1jkje2
  complexed with coa, gol, po4, so4
Domains for 1jll:
1. Domain d1jlla2: 1jll A:122-287 [66852]
  Other proteins in same PDB: d1jlla1, d1jllb1, d1jllb2, d1jlld1, d1jlle1, d1jlle2
  complexed with coa, po4, so4; mutant
2. Domain d1jlld2: 1jll D:122-287 [66856]
  Other proteins in same PDB: d1jlla1, d1jllb1, d1jllb2, d1jlld1, d1jlle1, d1jlle2
  complexed with coa, po4, so4; mutant
Domains for 1scu:
1. Domain d1scua2: 1scu A:122-288 [31135]
  Other proteins in same PDB: d1scua1, d1scub1, d1scub2, d1scud1, d1scue1, d1scue2
  complexed with coa
2. Domain d1scud2: 1scu D:122-288 [31136]
  Other proteins in same PDB: d1scua1, d1scub1, d1scub2, d1scud1, d1scue1, d1scue2
  complexed with coa
Domains for 2nu6:
1. Domain d2nu6a2: 2nu6 A:122-287 [148397]
  Other proteins in same PDB: d2nu6a1, d2nu6b1, d2nu6b2, d2nu6d1, d2nu6e1, d2nu6e2
  automated match to d2scua2
  complexed with coa, so4; mutant
2. Domain d2nu6d2: 2nu6 D:122-287 [148401]
  Other proteins in same PDB: d2nu6a1, d2nu6b1, d2nu6b2, d2nu6d1, d2nu6e1, d2nu6e2
  automated match to d2scua2
  complexed with coa, so4; mutant
Domains for 2nu7:
1. Domain d2nu7a2: 2nu7 A:122-287 [148405]
  Other proteins in same PDB: d2nu7a1, d2nu7b1, d2nu7b2, d2nu7d1, d2nu7e1, d2nu7e2
  automated match to d2scua2
  complexed with coa, po4, so4; mutant
2. Domain d2nu7d2: 2nu7 D:122-287 [148409]
  Other proteins in same PDB: d2nu7a1, d2nu7b1, d2nu7b2, d2nu7d1, d2nu7e1, d2nu7e2
  automated match to d2scua2
  complexed with coa, po4, so4; mutant
Domains for 2nu8:
1. Domain d2nu8a2: 2nu8 A:122-287 [148413]
  Other proteins in same PDB: d2nu8a1, d2nu8b1, d2nu8b2, d2nu8d1, d2nu8e1, d2nu8e2
  automated match to d2scua2
  complexed with coa, gol, po4, so4; mutant
2. Domain d2nu8d2: 2nu8 D:122-287 [148417]
  Other proteins in same PDB: d2nu8a1, d2nu8b1, d2nu8b2, d2nu8d1, d2nu8e1, d2nu8e2
  automated match to d2scua2
  complexed with coa, gol, po4, so4; mutant

Domains for 2nu9:

Domain d2nu9a2: 2nu9 A:122-286 [148421]
Other proteins in same PDB: d2nu9a1, d2nu9b1, d2nu9b2, d2nu9d1, d2nu9e1, d2nu9e2, d2nu9f1, d2nu9g1, d2nu9g2, d2nu9h1, d2nu9i1, d2nu9i2
automated match to d2scua2
complexed with coa, so4; mutant

Domain d2nu9d2: 2nu9 D:122-286 [148425]
Other proteins in same PDB: d2nu9a1, d2nu9b1, d2nu9b2, d2nu9d1, d2nu9e1, d2nu9e2, d2nu9f1, d2nu9g1, d2nu9g2, d2nu9h1, d2nu9i1, d2nu9i2
automated match to d2scua2
complexed with coa, so4; mutant

Domain d2nu9f2: 2nu9 F:122-286 [148429]
Other proteins in same PDB: d2nu9a1, d2nu9b1, d2nu9b2, d2nu9d1, d2nu9e1, d2nu9e2, d2nu9f1, d2nu9g1, d2nu9g2, d2nu9h1, d2nu9i1, d2nu9i2
automated match to d2scua2
complexed with coa, so4; mutant

Domain d2nu9h2: 2nu9 H:122-286 [148433]
Other proteins in same PDB: d2nu9a1, d2nu9b1, d2nu9b2, d2nu9d1, d2nu9e1, d2nu9e2, d2nu9f1, d2nu9g1, d2nu9g2, d2nu9h1, d2nu9i1, d2nu9i2
automated match to d2scua2
complexed with coa, so4; mutant

Domains for 2nua:
1. Domain d2nuaa2: 2nua A:122-287 [148437]
  Other proteins in same PDB: d2nuaa1, d2nuab1, d2nuab2, d2nuad1, d2nuae1, d2nuae2
  automated match to d2scua2
  complexed with coa, po4, so4; mutant
2. Domain d2nuad2: 2nua D:122-287 [148441]
  Other proteins in same PDB: d2nuaa1, d2nuab1, d2nuab2, d2nuad1, d2nuae1, d2nuae2
  automated match to d2scua2
  complexed with coa, po4, so4; mutant
Domains for 2scu:
1. Domain d2scua2: 2scu A:122-286 [31131]
  Other proteins in same PDB: d2scua1, d2scub1, d2scub2, d2scud1, d2scue1, d2scue2
  complexed with coa, so4
2. Domain d2scud2: 2scu D:122-286 [31132]
  Other proteins in same PDB: d2scua1, d2scub1, d2scub2, d2scud1, d2scue1, d2scue2
  complexed with coa, so4

Methanocaldococcus jannaschii [TaxId:243232] [225350] (1 PDB entry)
- Domain for 2yv1:
  - Domain d2yv1a2: 2yv1 A:128-293 [207719]
    Other proteins in same PDB: d2yv1a1
    automated match to d2scua2
Pig (Sus scrofa) [TaxId:9823] [52214] (8 PDB entries)
1. Domain for 1euc:
  - Domain d1euca2: 1euc A:131-306 [31139]
    Other proteins in same PDB: d1euca1, d1eucb1, d1eucb2, d1eucb3
    complexed with po4, so4, zn
2. Domain for 1eud:
  - Domain d1euda2: 1eud A:131-306 [31140]
    Other proteins in same PDB: d1euda1, d1eudb1, d1eudb2, d1eudb3
    complexed with so4
3. Domain for 2fp4:
  - Domain d2fp4a2: 2fp4 A:131-306 [133896]
    Other proteins in same PDB: d2fp4a1, d2fp4a3, d2fp4b1, d2fp4b2
    automated match to d1euda2
    complexed with gtp, k, mg
4. Domain for 2fpg:
  - Domain d2fpga2: 2fpg A:131-306 [133901]
    Other proteins in same PDB: d2fpga1, d2fpga3, d2fpgb1, d2fpgb2
    automated match to d1euda2
    complexed with gdp, k, po4
5. Domain for 2fpi:
  - Domain d2fpia2: 2fpi A:131-306 [133905]
    Other proteins in same PDB: d2fpia1, d2fpia3, d2fpib1, d2fpib2
    automated match to d1euda2
    complexed with so4
6. Domain for 2fpp:
  - Domain d2fppa2: 2fpp A:131-306 [133916]
    Other proteins in same PDB: d2fppa1, d2fppa3, d2fppb1, d2fppb2
    automated match to d1euda2
    complexed with cl, so4
7. Domain for 4xx0:
  - Domain d4xx0a2: 4xx0 A:131-304 [276061]
    Other proteins in same PDB: d4xx0a1, d4xx0b1, d4xx0b2
    automated match to d1euda2
    complexed with coa, gol, po4, so4
8. Domain for 5cae:
  - Domain d5caea2: 5cae A:131-304 [318909]
    Other proteins in same PDB: d5caea1, d5caeb1, d5caeb2
    automated match to d1euda2
    complexed with cl, coa, gol, mg, po4, sin
Thermus thermophilus [TaxId:274] [89589] (1 PDB entry)
- Domain for 1oi7:
  - Domain d1oi7a2: 1oi7 A:122-288 [87050]
    Other proteins in same PDB: d1oi7a1
    alpha-chain only

More info for Protein Succinyl-CoA synthetase, alpha-chain, C-terminal domain from c.23.4.1: Succinyl-CoA synthetase domains

Timeline for Protein Succinyl-CoA synthetase, alpha-chain, C-terminal domain from c.23.4.1: Succinyl-CoA synthetase domains:

Protein Succinyl-CoA synthetase, alpha-chain, C-terminal domain from c.23.4.1: Succinyl-CoA synthetase domains first appeared (with stable ids) in SCOP 1.55
Protein Succinyl-CoA synthetase, alpha-chain, C-terminal domain from c.23.4.1: Succinyl-CoA synthetase domains appears in SCOPe 2.05
Protein Succinyl-CoA synthetase, alpha-chain, C-terminal domain from c.23.4.1: Succinyl-CoA synthetase domains appears in SCOPe 2.07
Protein Succinyl-CoA synthetase, alpha-chain, C-terminal domain from c.23.4.1: Succinyl-CoA synthetase domains appears in the current release, SCOPe 2.08