SCOP 1.73: Protein: Uracil-DNA glycosylase

Lineage for Protein: Uracil-DNA glycosylase

Root: SCOP 1.73
Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
Fold c.18: Uracil-DNA glycosylase-like [52140] (1 superfamily)
3 layers, a/b/a; core: parallel beta-sheet of 4 strands, order 2134
Superfamily c.18.1: Uracil-DNA glycosylase-like [52141] (3 families)
Family c.18.1.1: Uracil-DNA glycosylase [52142] (1 protein)
Protein Uracil-DNA glycosylase [52143] (4 species)

Species:

Atlantic cod (Gadus morhua) [TaxId:8049] [102212] (1 PDB entry)
- Domains for 1okb:
  1. Domain d1okba_: 1okb A: [93246]
  2. Domain d1okbb_: 1okb B: [93247]
    complexed with cl, gol; mutant
Escherichia coli [TaxId:562] [52146] (12 PDB entries)
1. Domain for 1eug:
  - Domain d1euga_: 1eug A: [31021]
    CASP3
2. Domains for 1eui:
  1. Domain d1euia_: 1eui A: [31028]
    Other proteins in same PDB: d1euic_, d1euid_
  2. Domain d1euib_: 1eui B: [31029]
    Other proteins in same PDB: d1euic_, d1euid_
3. Domain for 1flz:
  - Domain d1flza_: 1flz A: [31027]
    complexed with ura; mutant
4. Domains for 1lqg:
  1. Domain d1lqga_: 1lqg A: [78131]
    Other proteins in same PDB: d1lqgc_, d1lqgd_
  2. Domain d1lqgb_: 1lqg B: [78132]
    Other proteins in same PDB: d1lqgc_, d1lqgd_
5. Domains for 1lqj:
  1. Domain d1lqja_: 1lqj A: [78135]
  2. Domain d1lqjb_: 1lqj B: [78136]
  3. Domain d1lqjc_: 1lqj C: [78137]
  4. Domain d1lqjd_: 1lqj D: [78138]
6. Domains for 1lqm:
  1. Domain d1lqma_: 1lqm A: [78141]
    Other proteins in same PDB: d1lqmb_, d1lqmd_, d1lqmf_, d1lqmh_
  2. Domain d1lqmc_: 1lqm C: [78143]
    Other proteins in same PDB: d1lqmb_, d1lqmd_, d1lqmf_, d1lqmh_
  3. Domain d1lqme_: 1lqm E: [78145]
    Other proteins in same PDB: d1lqmb_, d1lqmd_, d1lqmf_, d1lqmh_
  4. Domain d1lqmg_: 1lqm G: [78147]
    Other proteins in same PDB: d1lqmb_, d1lqmd_, d1lqmf_, d1lqmh_
7. Domains for 1uug:
  1. Domain d1uuga_: 1uug A: [31023]
    Other proteins in same PDB: d1uugb_, d1uugd_
  2. Domain d1uugc_: 1uug C: [31024]
    Other proteins in same PDB: d1uugb_, d1uugd_
8. Domain for 2eug:
  - Domain d2euga_: 2eug A: [31020]
    complexed with ura; mutant
9. Domains for 2uug:
  1. Domain d2uuga_: 2uug A: [31025]
    Other proteins in same PDB: d2uugc_, d2uugd_
  2. Domain d2uugb_: 2uug B: [31026]
    Other proteins in same PDB: d2uugc_, d2uugd_
    mutant
10. Domain for 3eug:
  - Domain d3euga_: 3eug A: [31018]
    complexed with gol; mutant
11. Domain for 4eug:
  - Domain d4euga_: 4eug A: [31019]
    mutant
12. Domain for 5eug:
  - Domain d5euga_: 5eug A: [31022]
    complexed with ura; mutant
Herpes simplex virus type 1 [TaxId:10298] [52145] (4 PDB entries)
1. Domain for 1lau:
  - Domain d1laue_: 1lau E: [31014]
    protein/DNA complex
2. Domain for 1udg:
  - Domain d1udga_: 1udg A: [31016]
    complexed with so4
3. Domain for 1udh:
  - Domain d1udha_: 1udh A: [31015]
    complexed with so4, ura
4. Domain for 1udi:
  - Domain d1udie_: 1udi E: [31017]
    Other proteins in same PDB: d1udii_
Human (Homo sapiens) [TaxId:9606] [52144] (9 PDB entries)
1. Domain for 1akz:
  - Domain d1akza_: 1akz A: [31007]
    mutant
2. Domain for 1emh:
  - Domain d1emha_: 1emh A: [31008]
    complexed with p2u; mutant
3. Domain for 1emj:
  - Domain d1emja_: 1emj A: [31011]
    complexed with asu, ura; mutant
4. Domain for 1q3f:
  - Domain d1q3fa_: 1q3f A: [95671]
    complexed with nri, po4, ura
5. Domain for 1ssp:
  - Domain d1sspe_: 1ssp E: [31009]
    complexed with d1p, ura
6. Domain for 1ugh:
  - Domain d1ughe_: 1ugh E: [31010]
    Other proteins in same PDB: d1ughi_
    mutant
7. Domain for 2hxm:
  - Domain d2hxma1: 2hxm A:82-304 [136857]
    automatically matched to d1akz__
    complexed with 302
8. Domain for 2ssp:
  - Domain d2sspe_: 2ssp E: [31012]
    complexed with d1p; mutant
9. Domain for 4skn:
  - Domain d4skne_: 4skn E: [31013]
    complexed with d1p, ura; mutant

More info for Protein Uracil-DNA glycosylase from c.18.1.1: Uracil-DNA glycosylase

Timeline for Protein Uracil-DNA glycosylase from c.18.1.1: Uracil-DNA glycosylase:

Protein Uracil-DNA glycosylase from c.18.1.1: Uracil-DNA glycosylase first appeared (with stable ids) in SCOP 1.55
Protein Uracil-DNA glycosylase from c.18.1.1: Uracil-DNA glycosylase appears in SCOP 1.71
Protein Uracil-DNA glycosylase from c.18.1.1: Uracil-DNA glycosylase appears in SCOP 1.75
Protein Uracil-DNA glycosylase from c.18.1.1: Uracil-DNA glycosylase appears in the current release, SCOPe 2.08