SCOPe 2.08: Family c.17.1.2: Gingipain R (RgpB), N-terminal domain

Lineage for Family c.17.1.2: Gingipain R (RgpB), N-terminal domain

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.17: Caspase-like [52128] (1 superfamily)
   3 layers, a/b/a; core: mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest

4. Superfamily c.17.1: Caspase-like [52129] (3 families)
   mature protein may be composed of two chains folded in a single domain

5. Family c.17.1.2: Gingipain R (RgpB), N-terminal domain [52137] (2 proteins)
   contains extra N-terminal alpha/beta subdomain
   automatically mapped to Pfam PF01364

Proteins:

1. Gingipain R (RgpB), N-terminal domain [52138] (1 species)
   Arginine-specific cysteine proteinase

   • Species Porphyromonas gingivalis [TaxId:837] [52139] (1 PDB entry)

2. automated matches [227116] (1 species)
   not a true protein

   • Species Porphyromonas gingivalis [TaxId:242619] [226634] (1 PDB entry)

More info for Family c.17.1.2: Gingipain R (RgpB), N-terminal domain

Timeline for Family c.17.1.2: Gingipain R (RgpB), N-terminal domain:

• Family c.17.1.2: Gingipain R (RgpB), N-terminal domain first appeared (with stable ids) in SCOP 1.55
  
• Family c.17.1.2: Gingipain R (RgpB), N-terminal domain appears in SCOPe 2.07