SCOP 1.73: Protein: Clp protease, ClpP subunit

Lineage for Protein: Clp protease, ClpP subunit

Root: SCOP 1.73
Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
Fold c.14: ClpP/crotonase [52095] (1 superfamily)
core: 4 turns of (beta-beta-alpha)n superhelix
Superfamily c.14.1: ClpP/crotonase [52096] (4 families)
Family c.14.1.1: Clp protease, ClpP subunit [52097] (1 protein)
Protein Clp protease, ClpP subunit [52098] (5 species)

Species:

Escherichia coli [TaxId:562] [52099] (4 PDB entries)
1. Domains for 1tyf:
  1. Domain d1tyfa_: 1tyf A: [30885]
  2. Domain d1tyfb_: 1tyf B: [30886]
  3. Domain d1tyfc_: 1tyf C: [30887]
  4. Domain d1tyfd_: 1tyf D: [30888]
  5. Domain d1tyfe_: 1tyf E: [30889]
  6. Domain d1tyff_: 1tyf F: [30890]
  7. Domain d1tyfg_: 1tyf G: [30891]
  8. Domain d1tyfh_: 1tyf H: [30892]
  9. Domain d1tyfi_: 1tyf I: [30893]
  10. Domain d1tyfj_: 1tyf J: [30894]
  11. Domain d1tyfk_: 1tyf K: [30895]
  12. Domain d1tyfl_: 1tyf L: [30896]
  13. Domain d1tyfm_: 1tyf M: [30897]
  14. Domain d1tyfn_: 1tyf N: [30898]
2. Domains for 1yg6:
  1. Domain d1yg6a1: 1yg6 A:11-193 [123100]
    automatically matched to d1tyfa_
    complexed with mpd
  2. Domain d1yg6b1: 1yg6 B:11-193 [123101]
    automatically matched to d1tyfa_
    complexed with mpd
  3. Domain d1yg6c1: 1yg6 C:11-193 [123102]
    automatically matched to d1tyfa_
    complexed with mpd
  4. Domain d1yg6d1: 1yg6 D:11-193 [123103]
    automatically matched to d1tyfa_
    complexed with mpd
  5. Domain d1yg6e1: 1yg6 E:11-193 [123104]
    automatically matched to d1tyfa_
    complexed with mpd
  6. Domain d1yg6f1: 1yg6 F:11-193 [123105]
    automatically matched to d1tyfa_
    complexed with mpd
  7. Domain d1yg6g1: 1yg6 G:11-193 [123106]
    automatically matched to d1tyfa_
    complexed with mpd
  8. Domain d1yg6h1: 1yg6 H:11-193 [123107]
    automatically matched to d1tyfa_
    complexed with mpd
  9. Domain d1yg6i1: 1yg6 I:11-193 [123108]
    automatically matched to d1tyfa_
    complexed with mpd
  10. Domain d1yg6j1: 1yg6 J:11-193 [123109]
    automatically matched to d1tyfa_
    complexed with mpd
  11. Domain d1yg6k1: 1yg6 K:16-193 [123110]
    automatically matched to d1tyfa_
    complexed with mpd
  12. Domain d1yg6l1: 1yg6 L:12-193 [123111]
    automatically matched to d1tyfa_
    complexed with mpd
  13. Domain d1yg6m1: 1yg6 M:12-193 [123112]
    automatically matched to d1tyfa_
    complexed with mpd
  14. Domain d1yg6n1: 1yg6 N:17-193 [123113]
    automatically matched to d1tyfa_
    complexed with mpd
3. Domains for 1yg8:
  1. Domain d1yg8a1: 1yg8 A:15-193 [123114]
    automatically matched to d1tyfa_
    also contains chains a and b
    mutant
  2. Domain d1yg8b1: 1yg8 B:15-193 [123115]
    automatically matched to d1tyfa_
    mutant
  3. Domain d1yg8c1: 1yg8 C:15-193 [123116]
    automatically matched to d1tyfa_
    mutant
  4. Domain d1yg8d1: 1yg8 D:15-193 [123117]
    automatically matched to d1tyfa_
    mutant
  5. Domain d1yg8e1: 1yg8 E:15-193 [123118]
    automatically matched to d1tyfa_
    mutant
  6. Domain d1yg8f1: 1yg8 F:15-193 [123119]
    automatically matched to d1tyfa_
    mutant
  7. Domain d1yg8g1: 1yg8 G:15-193 [123120]
    automatically matched to d1tyfa_
    mutant
  8. Domain d1yg8h1: 1yg8 H:15-193 [123121]
    automatically matched to d1tyfa_
    mutant
  9. Domain d1yg8i1: 1yg8 I:15-193 [123122]
    automatically matched to d1tyfa_
    mutant
  10. Domain d1yg8j1: 1yg8 J:15-193 [123123]
    automatically matched to d1tyfa_
    mutant
  11. Domain d1yg8k1: 1yg8 K:15-193 [123124]
    automatically matched to d1tyfa_
    mutant
  12. Domain d1yg8l1: 1yg8 L:15-193 [123125]
    automatically matched to d1tyfa_
    mutant
  13. Domain d1yg8m1: 1yg8 M:15-193 [123126]
    automatically matched to d1tyfa_
    mutant
  14. Domain d1yg8n1: 1yg8 N:15-193 [123127]
    automatically matched to d1tyfa_
    mutant
  15. Domain d1yg8o1: 1yg8 O:15-193 [123128]
    automatically matched to d1tyfa_
    mutant
  16. Domain d1yg8p1: 1yg8 P:15-193 [123129]
    automatically matched to d1tyfa_
    mutant
  17. Domain d1yg8q1: 1yg8 Q:15-193 [123130]
    automatically matched to d1tyfa_
    mutant
  18. Domain d1yg8r1: 1yg8 R:15-193 [123131]
    automatically matched to d1tyfa_
    mutant
  19. Domain d1yg8s1: 1yg8 S:15-193 [123132]
    automatically matched to d1tyfa_
    mutant
  20. Domain d1yg8t1: 1yg8 T:15-193 [123133]
    automatically matched to d1tyfa_
    mutant
  21. Domain d1yg8u1: 1yg8 U:15-193 [123134]
    automatically matched to d1tyfa_
    mutant
  22. Domain d1yg8v1: 1yg8 V:15-193 [123135]
    automatically matched to d1tyfa_
    mutant
  23. Domain d1yg8w1: 1yg8 W:15-193 [123136]
    automatically matched to d1tyfa_
    mutant
  24. Domain d1yg8x1: 1yg8 X:15-193 [123137]
    automatically matched to d1tyfa_
    mutant
  25. Domain d1yg8y1: 1yg8 Y:15-193 [123138]
    automatically matched to d1tyfa_
    mutant
  26. Domain d1yg8z1: 1yg8 Z:15-193 [123139]
    automatically matched to d1tyfa_
    mutant
4. Domains for 2fzs:
  1. Domain d2fzsa1: 2fzs A:15-193 [134462]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  2. Domain d2fzsb1: 2fzs B:15-193 [134463]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  3. Domain d2fzsc1: 2fzs C:15-193 [134464]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  4. Domain d2fzsd1: 2fzs D:16-193 [134465]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  5. Domain d2fzse1: 2fzs E:15-193 [134466]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  6. Domain d2fzsf1: 2fzs F:15-193 [134467]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  7. Domain d2fzsg1: 2fzs G:16-193 [134468]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  8. Domain d2fzsh1: 2fzs H:16-193 [134469]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  9. Domain d2fzsi1: 2fzs I:16-193 [134470]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  10. Domain d2fzsj1: 2fzs J:16-193 [134471]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  11. Domain d2fzsk1: 2fzs K:15-193 [134472]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  12. Domain d2fzsl1: 2fzs L:16-193 [134473]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  13. Domain d2fzsm1: 2fzs M:15-193 [134474]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
  14. Domain d2fzsn1: 2fzs N:16-193 [134475]
    automatically matched to d1tyfa_
    complexed with cmq, gol, pge
Human (Homo sapiens), mitochondrial [TaxId:9606] [141995] (1 PDB entry)
- Domains for 1tg6:
  1. Domain d1tg6a1: 1tg6 A:1-193 [119236]
    complexed with dio, edo, gol
  2. Domain d1tg6b1: 1tg6 B:1-192 [119237]
    automatically matched to 1TG6 A:1-193
    complexed with dio, edo, gol
  3. Domain d1tg6c1: 1tg6 C:1-192 [119238]
    automatically matched to 1TG6 A:1-193
    complexed with dio, edo, gol
  4. Domain d1tg6d1: 1tg6 D:1-193 [119239]
    automatically matched to 1TG6 A:1-193
    complexed with dio, edo, gol
  5. Domain d1tg6e1: 1tg6 E:1-193 [119240]
    automatically matched to 1TG6 A:1-193
    complexed with dio, edo, gol
  6. Domain d1tg6f1: 1tg6 F:1-193 [119241]
    automatically matched to 1TG6 A:1-193
    complexed with dio, edo, gol
  7. Domain d1tg6g1: 1tg6 G:1-193 [119242]
    automatically matched to 1TG6 A:1-193
    complexed with dio, edo, gol
Mycobacterium tuberculosis [TaxId:1773] [141997] (2 PDB entries)
1. Domains for 2cby:
  1. Domain d2cbya1: 2cby A:15-193 [130202]
  2. Domain d2cbyb1: 2cby B:15-193 [130203]
    automatically matched to 2CBY A:15-193
  3. Domain d2cbyc1: 2cby C:15-193 [130204]
    automatically matched to 2CBY A:15-193
  4. Domain d2cbyd1: 2cby D:15-193 [130205]
    automatically matched to 2CBY A:15-193
  5. Domain d2cbye1: 2cby E:15-193 [130206]
    automatically matched to 2CBY A:15-193
  6. Domain d2cbyf1: 2cby F:15-193 [130207]
    automatically matched to 2CBY A:15-193
  7. Domain d2cbyg1: 2cby G:15-191 [130208]
    automatically matched to 2CBY A:15-193
2. Domains for 2ce3:
  1. Domain d2ce3a1: 2ce3 A:15-191 [130297]
    automatically matched to 2CBY A:15-193
  2. Domain d2ce3b1: 2ce3 B:15-191 [130298]
    automatically matched to 2CBY A:15-193
  3. Domain d2ce3c1: 2ce3 C:15-191 [130299]
    automatically matched to 2CBY A:15-193
  4. Domain d2ce3d1: 2ce3 D:15-191 [130300]
    automatically matched to 2CBY A:15-193
  5. Domain d2ce3e1: 2ce3 E:15-193 [130301]
    automatically matched to 2CBY A:15-193
  6. Domain d2ce3f1: 2ce3 F:15-191 [130302]
    automatically matched to 2CBY A:15-193
  7. Domain d2ce3g1: 2ce3 G:15-191 [130303]
    automatically matched to 2CBY A:15-193
  8. Domain d2ce3h1: 2ce3 H:15-191 [130304]
    automatically matched to 2CBY A:15-193
  9. Domain d2ce3i1: 2ce3 I:15-191 [130305]
    automatically matched to 2CBY A:15-193
  10. Domain d2ce3j1: 2ce3 J:15-191 [130306]
    automatically matched to 2CBY A:15-193
  11. Domain d2ce3k1: 2ce3 K:15-191 [130307]
    automatically matched to 2CBY A:15-193
  12. Domain d2ce3l1: 2ce3 L:15-193 [130308]
    automatically matched to 2CBY A:15-193
  13. Domain d2ce3m1: 2ce3 M:15-191 [130309]
    automatically matched to 2CBY A:15-193
  14. Domain d2ce3n1: 2ce3 N:15-191 [130310]
    automatically matched to 2CBY A:15-193
Plasmodium falciparum [TaxId:5833] [141996] (1 PDB entry)
- Domains for 2f6i:
  1. Domain d2f6ia1: 2f6i A:177-366 [133040]
  2. Domain d2f6ib1: 2f6i B:177-365 [133041]
    automatically matched to 2F6I A:177-366
  3. Domain d2f6ic1: 2f6i C:177-365 [133042]
    automatically matched to 2F6I A:177-366
  4. Domain d2f6id1: 2f6i D:177-365 [133043]
    automatically matched to 2F6I A:177-366
  5. Domain d2f6ie1: 2f6i E:177-365 [133044]
    automatically matched to 2F6I A:177-366
  6. Domain d2f6if1: 2f6i F:177-365 [133045]
    automatically matched to 2F6I A:177-366
  7. Domain d2f6ig1: 2f6i G:177-366 [133046]
    automatically matched to 2F6I A:177-366
Streptococcus pneumoniae [TaxId:1313] [141998] (1 PDB entry)
- Domains for 1y7o:
  1. Domain d1y7oa1: 1y7o A:2-193 [122701]
    complexed with ca; mutant
  2. Domain d1y7ob1: 1y7o B:2-193 [122702]
    automatically matched to 1Y7O A:2-193
    complexed with ca; mutant
  3. Domain d1y7oc1: 1y7o C:2-193 [122703]
    automatically matched to 1Y7O A:2-193
    complexed with ca; mutant
  4. Domain d1y7od1: 1y7o D:2-193 [122704]
    automatically matched to 1Y7O A:2-193
    complexed with ca; mutant
  5. Domain d1y7oe1: 1y7o E:2-193 [122705]
    automatically matched to 1Y7O A:2-193
    complexed with ca; mutant
  6. Domain d1y7of1: 1y7o F:2-193 [122706]
    automatically matched to 1Y7O A:2-193
    complexed with ca; mutant
  7. Domain d1y7og1: 1y7o G:2-193 [122707]
    automatically matched to 1Y7O A:2-193
    complexed with ca; mutant

More info for Protein Clp protease, ClpP subunit from c.14.1.1: Clp protease, ClpP subunit

Timeline for Protein Clp protease, ClpP subunit from c.14.1.1: Clp protease, ClpP subunit:

Protein Clp protease, ClpP subunit from c.14.1.1: Clp protease, ClpP subunit first appeared (with stable ids) in SCOP 1.55
Protein Clp protease, ClpP subunit from c.14.1.1: Clp protease, ClpP subunit appears in SCOP 1.71
Protein Clp protease, ClpP subunit from c.14.1.1: Clp protease, ClpP subunit appears in SCOP 1.75
Protein Clp protease, ClpP subunit from c.14.1.1: Clp protease, ClpP subunit appears in the current release, SCOPe 2.08