Lineage for Protein: Clp protease, ClpP subunit

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2099098Fold c.14: ClpP/crotonase [52095] (1 superfamily)
    core: 4 turns of (beta-beta-alpha)n superhelix
  4. 2099099Superfamily c.14.1: ClpP/crotonase [52096] (5 families) (S)
  5. 2099100Family c.14.1.1: Clp protease, ClpP subunit [52097] (2 protein domains)
    automatically mapped to Pfam PF00574
  6. 2099101Protein Clp protease, ClpP subunit [52098] (9 species)

Species:

  1. 2099102Bacillus subtilis [TaxId:1423] [190014] (2 PDB entries)
    1. Domains for 3tt6:
      1. 2099110Domain d3tt6a_: 3tt6 A: [185936]
        automated match to d1tyfa_
      2. 2099111Domain d3tt6b_: 3tt6 B: [185937]
        automated match to d1tyfa_
      3. 2099112Domain d3tt6c_: 3tt6 C: [185938]
        automated match to d1tyfa_
      4. 2099113Domain d3tt6d_: 3tt6 D: [185939]
        automated match to d1tyfa_
      5. 2099114Domain d3tt6e_: 3tt6 E: [185940]
        automated match to d1tyfa_
      6. 2099115Domain d3tt6f_: 3tt6 F: [185941]
        automated match to d1tyfa_
      7. 2099116Domain d3tt6g_: 3tt6 G: [185942]
        automated match to d1tyfa_
    2. Domains for 3tt7:
      1. 2099103Domain d3tt7a_: 3tt7 A: [185943]
        automated match to d1tyfa_
        complexed with dfp
      2. 2099104Domain d3tt7b_: 3tt7 B: [185944]
        automated match to d1tyfa_
        complexed with dfp
      3. 2099105Domain d3tt7c_: 3tt7 C: [185945]
        automated match to d1tyfa_
        complexed with dfp
      4. 2099106Domain d3tt7d_: 3tt7 D: [185946]
        automated match to d1tyfa_
        complexed with dfp
      5. 2099107Domain d3tt7e_: 3tt7 E: [185947]
        automated match to d1tyfa_
        complexed with dfp
      6. 2099108Domain d3tt7f_: 3tt7 F: [185948]
        automated match to d1tyfa_
        complexed with dfp
      7. 2099109Domain d3tt7g_: 3tt7 G: [185949]
        automated match to d1tyfa_
        complexed with dfp
  2. 2099117Escherichia coli [TaxId:562] [52099] (1 PDB entry)
  3. 2099132Helicobacter pylori [TaxId:210] [188429] (4 PDB entries)
    1. Domains for 2zl0:
      1. 2099161Domain d2zl0a_: 2zl0 A: [171312]
        automated match to d1tyfa_
      2. 2099162Domain d2zl0b_: 2zl0 B: [171313]
        automated match to d1tyfa_
      3. 2099163Domain d2zl0c_: 2zl0 C: [171314]
        automated match to d1tyfa_
      4. 2099164Domain d2zl0d_: 2zl0 D: [171315]
        automated match to d1tyfa_
      5. 2099165Domain d2zl0e_: 2zl0 E: [171316]
        automated match to d1tyfa_
      6. 2099166Domain d2zl0f_: 2zl0 F: [171317]
        automated match to d1tyfa_
      7. 2099167Domain d2zl0g_: 2zl0 G: [171318]
        automated match to d1tyfa_
      8. 2099168Domain d2zl0h_: 2zl0 H: [171319]
        automated match to d1tyfa_
      9. 2099169Domain d2zl0i_: 2zl0 I: [171320]
        automated match to d1tyfa_
      10. 2099170Domain d2zl0j_: 2zl0 J: [171321]
        automated match to d1tyfa_
      11. 2099171Domain d2zl0k_: 2zl0 K: [171322]
        automated match to d1tyfa_
      12. 2099172Domain d2zl0l_: 2zl0 L: [171323]
        automated match to d1tyfa_
      13. 2099173Domain d2zl0m_: 2zl0 M: [171324]
        automated match to d1tyfa_
      14. 2099174Domain d2zl0n_: 2zl0 N: [171325]
        automated match to d1tyfa_
    2. Domains for 2zl2:
      1. 2099147Domain d2zl2a_: 2zl2 A: [171326]
        automated match to d1tyfa_
      2. 2099148Domain d2zl2b_: 2zl2 B: [171327]
        automated match to d1tyfa_
      3. 2099149Domain d2zl2c_: 2zl2 C: [171328]
        automated match to d1tyfa_
      4. 2099150Domain d2zl2d_: 2zl2 D: [171329]
        automated match to d1tyfa_
      5. 2099151Domain d2zl2e_: 2zl2 E: [171330]
        automated match to d1tyfa_
      6. 2099152Domain d2zl2f_: 2zl2 F: [171331]
        automated match to d1tyfa_
      7. 2099153Domain d2zl2g_: 2zl2 G: [171332]
        automated match to d1tyfa_
      8. 2099154Domain d2zl2h_: 2zl2 H: [171333]
        automated match to d1tyfa_
      9. 2099155Domain d2zl2i_: 2zl2 I: [171334]
        automated match to d1tyfa_
      10. 2099156Domain d2zl2j_: 2zl2 J: [171335]
        automated match to d1tyfa_
      11. 2099157Domain d2zl2k_: 2zl2 K: [171336]
        automated match to d1tyfa_
      12. 2099158Domain d2zl2l_: 2zl2 L: [171337]
        automated match to d1tyfa_
      13. 2099159Domain d2zl2m_: 2zl2 M: [171338]
        automated match to d1tyfa_
      14. 2099160Domain d2zl2n_: 2zl2 N: [171339]
        automated match to d1tyfa_
    3. Domains for 2zl3:
      1. 2099175Domain d2zl3a_: 2zl3 A: [171340]
        automated match to d1tyfa_
      2. 2099176Domain d2zl3b_: 2zl3 B: [171341]
        automated match to d1tyfa_
      3. 2099177Domain d2zl3c_: 2zl3 C: [171342]
        automated match to d1tyfa_
      4. 2099178Domain d2zl3d_: 2zl3 D: [171343]
        automated match to d1tyfa_
      5. 2099179Domain d2zl3e_: 2zl3 E: [171344]
        automated match to d1tyfa_
      6. 2099180Domain d2zl3f_: 2zl3 F: [171345]
        automated match to d1tyfa_
      7. 2099181Domain d2zl3g_: 2zl3 G: [171346]
        automated match to d1tyfa_
      8. 2099182Domain d2zl3h_: 2zl3 H: [171347]
        automated match to d1tyfa_
      9. 2099183Domain d2zl3i_: 2zl3 I: [171348]
        automated match to d1tyfa_
      10. 2099184Domain d2zl3j_: 2zl3 J: [171349]
        automated match to d1tyfa_
      11. 2099185Domain d2zl3k_: 2zl3 K: [171350]
        automated match to d1tyfa_
      12. 2099186Domain d2zl3l_: 2zl3 L: [171351]
        automated match to d1tyfa_
      13. 2099187Domain d2zl3m_: 2zl3 M: [171352]
        automated match to d1tyfa_
      14. 2099188Domain d2zl3n_: 2zl3 N: [171353]
        automated match to d1tyfa_
    4. Domains for 2zl4:
      1. 2099133Domain d2zl4a_: 2zl4 A: [171354]
        automated match to d1tyfa_
      2. 2099134Domain d2zl4b_: 2zl4 B: [171355]
        automated match to d1tyfa_
      3. 2099135Domain d2zl4c_: 2zl4 C: [171356]
        automated match to d1tyfa_
      4. 2099136Domain d2zl4d_: 2zl4 D: [171357]
        automated match to d1tyfa_
      5. 2099137Domain d2zl4e_: 2zl4 E: [171358]
        automated match to d1tyfa_
      6. 2099138Domain d2zl4f_: 2zl4 F: [171359]
        automated match to d1tyfa_
      7. 2099139Domain d2zl4g_: 2zl4 G: [171360]
        automated match to d1tyfa_
      8. 2099140Domain d2zl4h_: 2zl4 H: [171361]
        automated match to d1tyfa_
      9. 2099141Domain d2zl4i_: 2zl4 I: [171362]
        automated match to d1tyfa_
      10. 2099142Domain d2zl4j_: 2zl4 J: [171363]
        automated match to d1tyfa_
      11. 2099143Domain d2zl4k_: 2zl4 K: [171364]
        automated match to d1tyfa_
      12. 2099144Domain d2zl4l_: 2zl4 L: [171365]
        automated match to d1tyfa_
      13. 2099145Domain d2zl4m_: 2zl4 M: [171366]
        automated match to d1tyfa_
      14. 2099146Domain d2zl4n_: 2zl4 N: [171367]
        automated match to d1tyfa_
  4. 2099189Human (Homo sapiens), mitochondrial [TaxId:9606] [141995] (1 PDB entry)
    Uniprot Q16740 57-249
  5. 2099197Listeria monocytogenes [TaxId:1639] [311108] (1 PDB entry)
  6. 2099212Malaria parasite (Plasmodium falciparum) [TaxId:5833] [141996] (1 PDB entry)
    Uniprot O97252 177-366
  7. 2099220Mycobacterium tuberculosis [TaxId:1773] [141997] (1 PDB entry)
    Uniprot P0A526 15-193
  8. 2099222Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [141998] (1 PDB entry)
    Uniprot P63788 2-193
  9. 2099230Staphylococcus aureus [TaxId:196620] [189881] (4 PDB entries)
    1. Domains for 3st9:
      1. 2099245Domain d3st9a_: 3st9 A: [185524]
        automated match to d1tyfa_
        complexed with ca, gol, so4
      2. 2099246Domain d3st9b_: 3st9 B: [185525]
        automated match to d1tyfa_
        complexed with ca, gol, so4
      3. 2099247Domain d3st9c_: 3st9 C: [185526]
        automated match to d1tyfa_
        complexed with ca, gol, so4
      4. 2099248Domain d3st9d_: 3st9 D: [185527]
        automated match to d1tyfa_
        complexed with ca, gol, so4
      5. 2099249Domain d3st9e_: 3st9 E: [185528]
        automated match to d1tyfa_
        complexed with ca, gol, so4
      6. 2099250Domain d3st9f_: 3st9 F: [185529]
        automated match to d1tyfa_
        complexed with ca, gol, so4
      7. 2099251Domain d3st9g_: 3st9 G: [185530]
        automated match to d1tyfa_
        complexed with ca, gol, so4
    2. Domains for 3sta:
      1. 2099231Domain d3staa_: 3sta A: [185531]
        automated match to d1tyfa_
      2. 2099232Domain d3stab_: 3sta B: [185532]
        automated match to d1tyfa_
      3. 2099233Domain d3stac_: 3sta C: [185533]
        automated match to d1tyfa_
      4. 2099234Domain d3stae_: 3sta E: [185534]
        automated match to d1tyfa_
      5. 2099235Domain d3staf_: 3sta F: [185535]
        automated match to d1tyfa_
      6. 2099236Domain d3stag_: 3sta G: [185536]
        automated match to d1tyfa_
      7. 2099237Domain d3stai_: 3sta I: [185537]
        automated match to d1tyfa_
      8. 2099238Domain d3stak_: 3sta K: [185538]
        automated match to d1tyfa_
      9. 2099239Domain d3stal_: 3sta L: [185539]
        automated match to d1tyfa_
      10. 2099240Domain d3stam_: 3sta M: [185540]
        automated match to d1tyfa_
      11. 2099241Domain d3stan_: 3sta N: [185541]
        automated match to d1tyfa_
      12. 2099242Domain d3stas_: 3sta S: [185542]
        automated match to d1tyfa_
      13. 2099243Domain d3stat_: 3sta T: [185543]
        automated match to d1tyfa_
      14. 2099244Domain d3stav_: 3sta V: [185544]
        automated match to d1tyfa_
    3. Domains for 4emm:
      1. 2099252Domain d4emma_: 4emm A: [196835]
        automated match to d3qwdc_
      2. 2099253Domain d4emmb_: 4emm B: [196836]
        automated match to d3qwdc_
      3. 2099254Domain d4emmc_: 4emm C: [201864]
        automated match to d4emma_
      4. 2099255Domain d4emmd_: 4emm D: [201865]
        automated match to d4emma_
      5. 2099256Domain d4emme_: 4emm E: [201866]
        automated match to d4emma_
      6. 2099257Domain d4emmf_: 4emm F: [201867]
        automated match to d4emma_
      7. 2099258Domain d4emmg_: 4emm G: [201868]
        automated match to d4emma_
      8. 2099259Domain d4emmh_: 4emm H: [201869]
        automated match to d4emma_
      9. 2099260Domain d4emmi_: 4emm I: [201870]
        automated match to d4emma_
      10. 2099261Domain d4emmj_: 4emm J: [201871]
        automated match to d4emma_
      11. 2099262Domain d4emmk_: 4emm K: [201872]
        automated match to d4emma_
      12. 2099263Domain d4emml_: 4emm L: [201873]
        automated match to d4emma_
      13. 2099264Domain d4emmm_: 4emm M: [201874]
        automated match to d4emma_
      14. 2099265Domain d4emmv_: 4emm V: [201875]
        automated match to d4emma_
    4. Domains for 4emp:
      1. 2099266Domain d4empa_: 4emp A: [196834]
        automated match to d3qwdc_
        mutant
      2. 2099267Domain d4empb_: 4emp B: [230227]
        automated match to d4empa_
        mutant
      3. 2099268Domain d4empc_: 4emp C: [230225]
        automated match to d4empa_
        mutant
      4. 2099269Domain d4empe_: 4emp E: [230224]
        automated match to d4empa_
        mutant
      5. 2099270Domain d4empf_: 4emp F: [230233]
        automated match to d4empa_
        mutant
      6. 2099271Domain d4empg_: 4emp G: [230226]
        automated match to d4empa_
        mutant
      7. 2099272Domain d4empi_: 4emp I: [230232]
        automated match to d4empa_
        mutant
      8. 2099273Domain d4empk_: 4emp K: [230231]
        automated match to d4empa_
        mutant
      9. 2099274Domain d4empl_: 4emp L: [230230]
        automated match to d4empa_
        mutant
      10. 2099275Domain d4empm_: 4emp M: [230234]
        automated match to d4empa_
        mutant
      11. 2099276Domain d4empn_: 4emp N: [230228]
        automated match to d4empa_
        mutant
      12. 2099277Domain d4emps_: 4emp S: [230236]
        automated match to d4empa_
        mutant
      13. 2099278Domain d4empt_: 4emp T: [230229]
        automated match to d4empa_
        mutant
      14. 2099279Domain d4empv_: 4emp V: [230235]
        automated match to d4empa_
        mutant

More info for Protein Clp protease, ClpP subunit from c.14.1.1: Clp protease, ClpP subunit

Timeline for Protein Clp protease, ClpP subunit from c.14.1.1: Clp protease, ClpP subunit: