SCOPe 2.08: Superfamily c.10.2: L domain-like

Lineage for Superfamily c.10.2: L domain-like

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
   2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies

4. Superfamily c.10.2: L domain-like [52058] (9 families)
   less regular structure consisting of variable repeats

Families:

1. c.10.2.1: Internalin LRR domain [52059] (4 proteins)
   capped at the N-end with a truncated EF-hand subdomain
   this is a repeat family; one repeat unit is 2omx A:261-239 found in domain

2. c.10.2.2: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain [52062] (1 protein)
   this is a repeat family; one repeat unit is 1dce A:472-495 found in domain

3. c.10.2.3: mRNA export factor tap [52065] (2 proteins)
   this is a repeat family; one repeat unit is 1fo1 A:248-278 found in domain

4. c.10.2.4: U2A'-like [52068] (2 proteins)
   duplication: consists of 5-6 partly irregular repeats
   this is a repeat family; one repeat unit is 1a9n C:89-114 found in domain

5. c.10.2.5: L domain [52071] (6 proteins)
   this is a repeat family; one repeat unit is 1n8z C:42-66 found in domain

6. c.10.2.6: Leucine rich effector protein YopM [69433] (1 protein)
   this is a repeat family; one repeat unit is 1g9u A:139-161 found in domain

7. c.10.2.7: Ngr ectodomain-like [75142] (7 proteins)
   applies to all domains of a family if the common domain is composed of a different number of small repeating units
   this is a repeat family; one repeat unit is 1xwd C:97-122 found in domain

8. c.10.2.8: Polygalacturonase inhibiting protein PGIP [89569] (1 protein)
   this is a repeat family; one repeat unit is 1ogq A:110-134 found in domain

9. c.10.2.0: automated matches [191489] (1 protein)
   not a true family

More info for Superfamily c.10.2: L domain-like

Timeline for Superfamily c.10.2: L domain-like:

• Superfamily c.10.2: L domain-like first appeared (with stable ids) in SCOP 1.55
  
• Superfamily c.10.2: L domain-like appears in SCOPe 2.07