Lineage for Species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2851636Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
    2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies
  4. 2851637Superfamily c.10.1: RNI-like [52047] (4 families) (S)
    regular structure consisting of similar repeats
  5. 2851667Family c.10.1.2: Rna1p (RanGAP1), N-terminal domain [52052] (1 protein)
    this is a repeat family; one repeat unit is 1k5d C:168-196 found in domain
  6. 2851668Protein Rna1p (RanGAP1), N-terminal domain [52053] (1 species)
    GTPase-activating protein for SpI1, ortologue of Ran
    duplication: consists of 11 repeats
  7. 2851669Species Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] [52054] (4 PDB entries)

PDB entries in Species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]:

  1. Domain(s) for 1k5d:
    1. 2851672Domain d1k5dc_: 1k5d C: [68170]
      Other proteins in same PDB: d1k5da_, d1k5db_, d1k5dd_, d1k5de_, d1k5dg_, d1k5dh_, d1k5dj_, d1k5dk_
      complexed with gnp, mg
    2. 2851673Domain d1k5df_: 1k5d F: [68173]
      Other proteins in same PDB: d1k5da_, d1k5db_, d1k5dd_, d1k5de_, d1k5dg_, d1k5dh_, d1k5dj_, d1k5dk_
      complexed with gnp, mg
    3. 2851674Domain d1k5di_: 1k5d I: [68176]
      Other proteins in same PDB: d1k5da_, d1k5db_, d1k5dd_, d1k5de_, d1k5dg_, d1k5dh_, d1k5dj_, d1k5dk_
      complexed with gnp, mg
    4. 2851675Domain d1k5dl_: 1k5d L: [68179]
      Other proteins in same PDB: d1k5da_, d1k5db_, d1k5dd_, d1k5de_, d1k5dg_, d1k5dh_, d1k5dj_, d1k5dk_
      complexed with gnp, mg
  2. Domain(s) for 1k5g:
    1. 2851678Domain d1k5gc_: 1k5g C: [68182]
      Other proteins in same PDB: d1k5ga_, d1k5gb_, d1k5gd_, d1k5ge_, d1k5gg_, d1k5gh_, d1k5gj_, d1k5gk_
      complexed with af3, gdp, mg
    2. 2851679Domain d1k5gf_: 1k5g F: [68185]
      Other proteins in same PDB: d1k5ga_, d1k5gb_, d1k5gd_, d1k5ge_, d1k5gg_, d1k5gh_, d1k5gj_, d1k5gk_
      complexed with af3, gdp, mg
    3. 2851680Domain d1k5gi_: 1k5g I: [68188]
      Other proteins in same PDB: d1k5ga_, d1k5gb_, d1k5gd_, d1k5ge_, d1k5gg_, d1k5gh_, d1k5gj_, d1k5gk_
      complexed with af3, gdp, mg
    4. 2851681Domain d1k5gl_: 1k5g L: [68191]
      Other proteins in same PDB: d1k5ga_, d1k5gb_, d1k5gd_, d1k5ge_, d1k5gg_, d1k5gh_, d1k5gj_, d1k5gk_
      complexed with af3, gdp, mg
  3. Domain(s) for 1yrg:
    1. 2851676Domain d1yrga_: 1yrg A: [30854]
    2. 2851677Domain d1yrgb_: 1yrg B: [30855]
  4. Domain(s) for 2ca6:
    1. 2851670Domain d2ca6a_: 2ca6 A: [130151]
      automated match to d1k5dc_
      complexed with so4
    2. 2851671Domain d2ca6b_: 2ca6 B: [130152]
      automated match to d1k5dc_
      complexed with so4

More info for Species Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] from c.10.1.2 Rna1p (RanGAP1), N-terminal domain

Timeline for Species Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] from c.10.1.2 Rna1p (RanGAP1), N-terminal domain: