SCOPe 2.05: Protein: Rna1p (RanGAP1), N-terminal domain

Lineage for Protein: Rna1p (RanGAP1), N-terminal domain

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies

Superfamily c.10.1: RNI-like [52047] (4 families)
regular structure consisting of similar repeats
Family c.10.1.2: Rna1p (RanGAP1), N-terminal domain [52052] (1 protein)
this is a repeat family; one repeat unit is 1k5d C:168-196 found in domain
Protein Rna1p (RanGAP1), N-terminal domain [52053] (1 species)
GTPase-activating protein for SpI1, ortologue of Ran
duplication: consists of 11 repeats

Species:

Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] [52054] (4 PDB entries)
1. Domains for 1k5d:
  1. Domain d1k5dc_: 1k5d C: [68170]
    Other proteins in same PDB: d1k5da_, d1k5db_, d1k5dd_, d1k5de_, d1k5dg_, d1k5dh_, d1k5dj_, d1k5dk_
    complexed with gnp, mg
  2. Domain d1k5df_: 1k5d F: [68173]
    Other proteins in same PDB: d1k5da_, d1k5db_, d1k5dd_, d1k5de_, d1k5dg_, d1k5dh_, d1k5dj_, d1k5dk_
    complexed with gnp, mg
  3. Domain d1k5di_: 1k5d I: [68176]
    Other proteins in same PDB: d1k5da_, d1k5db_, d1k5dd_, d1k5de_, d1k5dg_, d1k5dh_, d1k5dj_, d1k5dk_
    complexed with gnp, mg
  4. Domain d1k5dl_: 1k5d L: [68179]
    Other proteins in same PDB: d1k5da_, d1k5db_, d1k5dd_, d1k5de_, d1k5dg_, d1k5dh_, d1k5dj_, d1k5dk_
    complexed with gnp, mg
2. Domains for 1k5g:
  1. Domain d1k5gc_: 1k5g C: [68182]
    Other proteins in same PDB: d1k5ga_, d1k5gb_, d1k5gd_, d1k5ge_, d1k5gg_, d1k5gh_, d1k5gj_, d1k5gk_
    complexed with af3, gdp, mg
  2. Domain d1k5gf_: 1k5g F: [68185]
    Other proteins in same PDB: d1k5ga_, d1k5gb_, d1k5gd_, d1k5ge_, d1k5gg_, d1k5gh_, d1k5gj_, d1k5gk_
    complexed with af3, gdp, mg
  3. Domain d1k5gi_: 1k5g I: [68188]
    Other proteins in same PDB: d1k5ga_, d1k5gb_, d1k5gd_, d1k5ge_, d1k5gg_, d1k5gh_, d1k5gj_, d1k5gk_
    complexed with af3, gdp, mg
  4. Domain d1k5gl_: 1k5g L: [68191]
    Other proteins in same PDB: d1k5ga_, d1k5gb_, d1k5gd_, d1k5ge_, d1k5gg_, d1k5gh_, d1k5gj_, d1k5gk_
    complexed with af3, gdp, mg
3. Domains for 1yrg:
  1. Domain d1yrga_: 1yrg A: [30854]
  2. Domain d1yrgb_: 1yrg B: [30855]
4. Domains for 2ca6:
  1. Domain d2ca6a_: 2ca6 A: [130151]
    automated match to d1k5dc_
    complexed with so4
  2. Domain d2ca6b_: 2ca6 B: [130152]
    automated match to d1k5dc_
    complexed with so4

More info for Protein Rna1p (RanGAP1), N-terminal domain from c.10.1.2: Rna1p (RanGAP1), N-terminal domain

Timeline for Protein Rna1p (RanGAP1), N-terminal domain from c.10.1.2: Rna1p (RanGAP1), N-terminal domain:

Protein Rna1p (RanGAP1), N-terminal domain from c.10.1.2: Rna1p (RanGAP1), N-terminal domain first appeared (with stable ids) in SCOP 1.55, called Protein Rna1p from c.10.1.2: Rna1p
Protein Rna1p (RanGAP1), N-terminal domain from c.10.1.2: Rna1p (RanGAP1), N-terminal domain appears in SCOPe 2.04
Protein Rna1p (RanGAP1), N-terminal domain from c.10.1.2: Rna1p (RanGAP1), N-terminal domain appears in SCOPe 2.06
Protein Rna1p (RanGAP1), N-terminal domain from c.10.1.2: Rna1p (RanGAP1), N-terminal domain appears in the current release, SCOPe 2.08