SCOPe 2.05: Species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Lineage for Species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.4: Nucleotide-binding domain [51970] (1 superfamily)
3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like

Superfamily c.4.1: Nucleotide-binding domain [51971] (3 families)

this superfamily shares the common nucleotide-binding site with and provides a link between the Rossmann-fold NAD(P)-binding and FAD/NAD(P)-binding domains

Family c.4.1.1: N-terminal domain of adrenodoxin reductase-like [51972] (5 proteins)
Protein Trimethylamine dehydrogenase, middle domain [51973] (1 species)
Species Methylophilus methylotrophus, w3a1 [TaxId:17] [51974] (5 PDB entries)

PDB entries in Species: Methylophilus methylotrophus, w3a1 [TaxId: 17]:

Domain(s) for 1djn:
1. Domain d1djna3: 1djn A:341-489,A:646-729 [30598]
  Other proteins in same PDB: d1djna1, d1djna2, d1djnb1, d1djnb2
  complexed with adp, fmn, sf4
2. Domain d1djnb3: 1djn B:341-489,B:646-729 [30599]
  Other proteins in same PDB: d1djna1, d1djna2, d1djnb1, d1djnb2
  complexed with adp, fmn, sf4
Domain(s) for 1djq:
1. Domain d1djqa3: 1djq A:341-489,A:646-729 [30600]
  Other proteins in same PDB: d1djqa1, d1djqa2, d1djqb1, d1djqb2
  complexed with adp, fmn, sf4; mutant
2. Domain d1djqb3: 1djq B:341-489,B:646-729 [30601]
  Other proteins in same PDB: d1djqa1, d1djqa2, d1djqb1, d1djqb2
  complexed with adp, fmn, sf4; mutant
Domain(s) for 1o94:
1. Domain d1o94a3: 1o94 A:341-489,A:646-729 [81202]
  Other proteins in same PDB: d1o94a1, d1o94a2, d1o94b1, d1o94b2, d1o94c_, d1o94d_, d1o94e_, d1o94f_
  complexed with adp, amp, fmn, sf4
2. Domain d1o94b3: 1o94 B:341-489,B:646-729 [81205]
  Other proteins in same PDB: d1o94a1, d1o94a2, d1o94b1, d1o94b2, d1o94c_, d1o94d_, d1o94e_, d1o94f_
  complexed with adp, amp, fmn, sf4
Domain(s) for 1o95:
1. Domain d1o95a3: 1o95 A:341-489,A:646-729 [81212]
  Other proteins in same PDB: d1o95a1, d1o95a2, d1o95b1, d1o95b2, d1o95c_, d1o95d_, d1o95e_, d1o95f_
  complexed with adp, amp, fmn, sf4
2. Domain d1o95b3: 1o95 B:341-489,B:646-729 [81215]
  Other proteins in same PDB: d1o95a1, d1o95a2, d1o95b1, d1o95b2, d1o95c_, d1o95d_, d1o95e_, d1o95f_
  complexed with adp, amp, fmn, sf4
Domain(s) for 2tmd:
1. Domain d2tmda3: 2tmd A:341-489,A:646-729 [30602]
  Other proteins in same PDB: d2tmda1, d2tmda2, d2tmdb1, d2tmdb2
  complexed with adp, fmn, sf4
2. Domain d2tmdb3: 2tmd B:341-489,B:646-729 [30603]
  Other proteins in same PDB: d2tmda1, d2tmda2, d2tmdb1, d2tmdb2
  complexed with adp, fmn, sf4

More info for Species Methylophilus methylotrophus, w3a1 [TaxId:17] from c.4.1.1 Trimethylamine dehydrogenase, middle domain

Timeline for Species Methylophilus methylotrophus, w3a1 [TaxId:17] from c.4.1.1 Trimethylamine dehydrogenase, middle domain:

Species Methylophilus methylotrophus, w3a1 [TaxId:17] from c.4.1.1 Trimethylamine dehydrogenase, middle domain first appeared (with stable ids) in SCOP 1.55
Species Methylophilus methylotrophus, w3a1 [TaxId:17] from c.4.1.1 Trimethylamine dehydrogenase, middle domain appears in SCOPe 2.04
Species Methylophilus methylotrophus, w3a1 [TaxId:17] from c.4.1.1 Trimethylamine dehydrogenase, middle domain appears in SCOPe 2.06
Species Methylophilus methylotrophus, w3a1 [TaxId:17] from c.4.1.1 Trimethylamine dehydrogenase, middle domain appears in the current release, SCOPe 2.08