SCOPe 2.08: Protein: L-aminoacid oxidase

Lineage for Protein: L-aminoacid oxidase

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.3: FAD/NAD(P)-binding domain [51904] (1 superfamily)
core: 3 layers, b/b/a; central parallel beta-sheet of 5 strands, order 32145; top antiparallel beta-sheet of 3 strands, meander
Superfamily c.3.1: FAD/NAD(P)-binding domain [51905] (9 families)
Family c.3.1.2: FAD-linked reductases, N-terminal domain [51913] (18 proteins)
C-terminal domain is alpha+beta is common for the family
Protein L-aminoacid oxidase [51929] (2 species)

Species:

Halys viper (Agkistrodon halys) [TaxId:8714] [102179] (4 PDB entries)
Uniprot Q90W54 21-504
1. Domain for 1reo:
  - Domain d1reoa1: 1reo A:3-319,A:433-486 [97325]
    Other proteins in same PDB: d1reoa2
    complexed with cit, fad, nag
2. Domain for 1tdk:
  - Domain d1tdka1: 1tdk A:3-319,A:433-486 [106775]
    Other proteins in same PDB: d1tdka2
    complexed with fad, lvg, nag
3. Domain for 1tdn:
  - Domain d1tdna1: 1tdn A:3-319,A:433-486 [106777]
    Other proteins in same PDB: d1tdna2
    complexed with fad, leu, nag
4. Domain for 1tdo:
  - Domain d1tdoa1: 1tdo A:3-319,A:433-486 [106779]
    Other proteins in same PDB: d1tdoa2
    complexed with fad, nag, phe
Malayan pit viper (Calloselasma rhodostoma) [TaxId:8717] [51930] (3 PDB entries)
1. Domains for 1f8r:
  1. Domain d1f8ra1: 1f8r A:4-319,A:433-486 [30410]
    Other proteins in same PDB: d1f8ra2, d1f8rb2, d1f8rc2, d1f8rd2
    complexed with cit, fad, nag
  2. Domain d1f8rb1: 1f8r B:4-319,B:433-486 [30411]
    Other proteins in same PDB: d1f8ra2, d1f8rb2, d1f8rc2, d1f8rd2
    complexed with cit, fad, nag
  3. Domain d1f8rc1: 1f8r C:4-319,C:433-486 [30412]
    Other proteins in same PDB: d1f8ra2, d1f8rb2, d1f8rc2, d1f8rd2
    complexed with cit, fad, nag
  4. Domain d1f8rd1: 1f8r D:4-319,D:433-486 [30413]
    Other proteins in same PDB: d1f8ra2, d1f8rb2, d1f8rc2, d1f8rd2
    complexed with cit, fad, nag
2. Domains for 1f8s:
  1. Domain d1f8sa1: 1f8s A:5-319,A:433-486 [30414]
    Other proteins in same PDB: d1f8sa2, d1f8sb2, d1f8sc2, d1f8sd2, d1f8se2, d1f8sf2, d1f8sg2, d1f8sh2
    complexed with be2, fad, nag
  2. Domain d1f8sb1: 1f8s B:5-319,B:433-486 [30415]
    Other proteins in same PDB: d1f8sa2, d1f8sb2, d1f8sc2, d1f8sd2, d1f8se2, d1f8sf2, d1f8sg2, d1f8sh2
    complexed with be2, fad, nag
  3. Domain d1f8sc1: 1f8s C:5-319,C:433-486 [30416]
    Other proteins in same PDB: d1f8sa2, d1f8sb2, d1f8sc2, d1f8sd2, d1f8se2, d1f8sf2, d1f8sg2, d1f8sh2
    complexed with be2, fad, nag
  4. Domain d1f8sd1: 1f8s D:5-319,D:433-486 [30417]
    Other proteins in same PDB: d1f8sa2, d1f8sb2, d1f8sc2, d1f8sd2, d1f8se2, d1f8sf2, d1f8sg2, d1f8sh2
    complexed with be2, fad, nag
  5. Domain d1f8se1: 1f8s E:5-319,E:433-486 [30418]
    Other proteins in same PDB: d1f8sa2, d1f8sb2, d1f8sc2, d1f8sd2, d1f8se2, d1f8sf2, d1f8sg2, d1f8sh2
    complexed with be2, fad, nag
  6. Domain d1f8sf1: 1f8s F:5-319,F:433-486 [30419]
    Other proteins in same PDB: d1f8sa2, d1f8sb2, d1f8sc2, d1f8sd2, d1f8se2, d1f8sf2, d1f8sg2, d1f8sh2
    complexed with be2, fad, nag
  7. Domain d1f8sg1: 1f8s G:5-319,G:433-486 [30420]
    Other proteins in same PDB: d1f8sa2, d1f8sb2, d1f8sc2, d1f8sd2, d1f8se2, d1f8sf2, d1f8sg2, d1f8sh2
    complexed with be2, fad, nag
  8. Domain d1f8sh1: 1f8s H:5-319,H:433-486 [30421]
    Other proteins in same PDB: d1f8sa2, d1f8sb2, d1f8sc2, d1f8sd2, d1f8se2, d1f8sf2, d1f8sg2, d1f8sh2
    complexed with be2, fad, nag
3. Domains for 2iid:
  1. Domain d2iida1: 2iid A:4-319,A:433-486 [137426]
    Other proteins in same PDB: d2iida2, d2iidb2, d2iidc2, d2iidd2
    automated match to d1f8ra1
    complexed with fad, nag, phe
  2. Domain d2iidb1: 2iid B:4-319,B:433-486 [137428]
    Other proteins in same PDB: d2iida2, d2iidb2, d2iidc2, d2iidd2
    automated match to d1f8ra1
    complexed with fad, nag, phe
  3. Domain d2iidc1: 2iid C:4-319,C:433-486 [137430]
    Other proteins in same PDB: d2iida2, d2iidb2, d2iidc2, d2iidd2
    automated match to d1f8ra1
    complexed with fad, nag, phe
  4. Domain d2iidd1: 2iid D:4-319,D:433-486 [137432]
    Other proteins in same PDB: d2iida2, d2iidb2, d2iidc2, d2iidd2
    automated match to d1f8ra1
    complexed with fad, nag, phe

More info for Protein L-aminoacid oxidase from c.3.1.2: FAD-linked reductases, N-terminal domain

Timeline for Protein L-aminoacid oxidase from c.3.1.2: FAD-linked reductases, N-terminal domain:

Protein L-aminoacid oxidase from c.3.1.2: FAD-linked reductases, N-terminal domain first appeared (with stable ids) in SCOP 1.55, called Protein L-amino acid oxidase from c.3.1.2: FAD-linked reductases, N-terminal domain
Protein L-aminoacid oxidase from c.3.1.2: FAD-linked reductases, N-terminal domain appears in SCOPe 2.07