Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2841004Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2841005Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2845190Family c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain [51883] (12 proteins)
    extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site
  6. 2845344Protein Mitochondrial NAD(P)-dependent malic enzyme [51898] (3 species)
    includes C-terminal additional subdomains
  7. 2845362Species Human (Homo sapiens) [TaxId:9606] [51899] (10 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1do8:
    1. 2845381Domain d1do8a1: 1do8 A:280-573 [30289]
      Other proteins in same PDB: d1do8a2, d1do8b4, d1do8c4, d1do8d4
      complexed with mn, nad, oxl
      has additional subdomain(s) that are not in the common domain
    2. 2845382Domain d1do8b3: 1do8 B:1280-1573 [197453]
      Other proteins in same PDB: d1do8a2, d1do8b4, d1do8c4, d1do8d4
      complexed with mn, nad, oxl
      has additional subdomain(s) that are not in the common domain
    3. 2845383Domain d1do8c3: 1do8 C:2280-2573 [197455]
      Other proteins in same PDB: d1do8a2, d1do8b4, d1do8c4, d1do8d4
      complexed with mn, nad, oxl
      has additional subdomain(s) that are not in the common domain
    4. 2845384Domain d1do8d3: 1do8 D:3280-3573 [197457]
      Other proteins in same PDB: d1do8a2, d1do8b4, d1do8c4, d1do8d4
      complexed with mn, nad, oxl
      has additional subdomain(s) that are not in the common domain
  2. Domain(s) for 1efk:
    1. 2845385Domain d1efka1: 1efk A:280-573 [30299]
      Other proteins in same PDB: d1efka2, d1efkb2, d1efkc2, d1efkd2
      complexed with mak, mg, nad
      has additional subdomain(s) that are not in the common domain
    2. 2845386Domain d1efkb1: 1efk B:280-573 [30300]
      Other proteins in same PDB: d1efka2, d1efkb2, d1efkc2, d1efkd2
      complexed with mak, mg, nad
      has additional subdomain(s) that are not in the common domain
    3. 2845387Domain d1efkc1: 1efk C:280-573 [30301]
      Other proteins in same PDB: d1efka2, d1efkb2, d1efkc2, d1efkd2
      complexed with mak, mg, nad
      has additional subdomain(s) that are not in the common domain
    4. 2845388Domain d1efkd1: 1efk D:280-573 [30302]
      Other proteins in same PDB: d1efka2, d1efkb2, d1efkc2, d1efkd2
      complexed with mak, mg, nad
      has additional subdomain(s) that are not in the common domain
  3. Domain(s) for 1efl:
    1. 2845377Domain d1efla1: 1efl A:280-573 [30295]
      Other proteins in same PDB: d1efla2, d1eflb2, d1eflc2, d1efld2
      complexed with mg, nad, ttn
      has additional subdomain(s) that are not in the common domain
    2. 2845378Domain d1eflb1: 1efl B:280-573 [30296]
      Other proteins in same PDB: d1efla2, d1eflb2, d1eflc2, d1efld2
      complexed with mg, nad, ttn
      has additional subdomain(s) that are not in the common domain
    3. 2845379Domain d1eflc1: 1efl C:280-573 [30297]
      Other proteins in same PDB: d1efla2, d1eflb2, d1eflc2, d1efld2
      complexed with mg, nad, ttn
      has additional subdomain(s) that are not in the common domain
    4. 2845380Domain d1efld1: 1efl D:280-573 [30298]
      Other proteins in same PDB: d1efla2, d1eflb2, d1eflc2, d1efld2
      complexed with mg, nad, ttn
      has additional subdomain(s) that are not in the common domain
  4. Domain(s) for 1gz3:
    1. 2845389Domain d1gz3a1: 1gz3 A:280-573 [83393]
      Other proteins in same PDB: d1gz3a2, d1gz3b2, d1gz3c2, d1gz3d2
      complexed with atp, fum, mn, oxl
      has additional subdomain(s) that are not in the common domain
    2. 2845390Domain d1gz3b1: 1gz3 B:280-573 [83395]
      Other proteins in same PDB: d1gz3a2, d1gz3b2, d1gz3c2, d1gz3d2
      complexed with atp, fum, mn, oxl
      has additional subdomain(s) that are not in the common domain
    3. 2845391Domain d1gz3c1: 1gz3 C:280-573 [83397]
      Other proteins in same PDB: d1gz3a2, d1gz3b2, d1gz3c2, d1gz3d2
      complexed with atp, fum, mn, oxl
      has additional subdomain(s) that are not in the common domain
    4. 2845392Domain d1gz3d1: 1gz3 D:280-573 [83399]
      Other proteins in same PDB: d1gz3a2, d1gz3b2, d1gz3c2, d1gz3d2
      complexed with atp, fum, mn, oxl
      has additional subdomain(s) that are not in the common domain
  5. Domain(s) for 1gz4:
    1. 2845367Domain d1gz4a1: 1gz4 A:280-573 [70794]
      Other proteins in same PDB: d1gz4a2, d1gz4b2, d1gz4c2, d1gz4d2
      complexed with atp, fum, mn, ttn
      has additional subdomain(s) that are not in the common domain
    2. 2845368Domain d1gz4b1: 1gz4 B:280-573 [70796]
      Other proteins in same PDB: d1gz4a2, d1gz4b2, d1gz4c2, d1gz4d2
      complexed with atp, fum, mn, ttn
      has additional subdomain(s) that are not in the common domain
    3. 2845369Domain d1gz4c1: 1gz4 C:280-573 [70798]
      Other proteins in same PDB: d1gz4a2, d1gz4b2, d1gz4c2, d1gz4d2
      complexed with atp, fum, mn, ttn
      has additional subdomain(s) that are not in the common domain
    4. 2845370Domain d1gz4d1: 1gz4 D:280-573 [70800]
      Other proteins in same PDB: d1gz4a2, d1gz4b2, d1gz4c2, d1gz4d2
      complexed with atp, fum, mn, ttn
      has additional subdomain(s) that are not in the common domain
  6. Domain(s) for 1pj2:
    1. 2845393Domain d1pj2a1: 1pj2 A:280-573 [94718]
      Other proteins in same PDB: d1pj2a2, d1pj2b2, d1pj2c2, d1pj2d2
      complexed with fum, lmr, mn, nai
      has additional subdomain(s) that are not in the common domain
    2. 2845394Domain d1pj2b1: 1pj2 B:1280-1573 [94720]
      Other proteins in same PDB: d1pj2a2, d1pj2b2, d1pj2c2, d1pj2d2
      complexed with fum, lmr, mn, nai
      has additional subdomain(s) that are not in the common domain
    3. 2845395Domain d1pj2c1: 1pj2 C:2280-2573 [94722]
      Other proteins in same PDB: d1pj2a2, d1pj2b2, d1pj2c2, d1pj2d2
      complexed with fum, lmr, mn, nai
      has additional subdomain(s) that are not in the common domain
    4. 2845396Domain d1pj2d1: 1pj2 D:3280-3573 [94724]
      Other proteins in same PDB: d1pj2a2, d1pj2b2, d1pj2c2, d1pj2d2
      complexed with fum, lmr, mn, nai
      has additional subdomain(s) that are not in the common domain
  7. Domain(s) for 1pj3:
    1. 2845363Domain d1pj3a1: 1pj3 A:280-573 [94726]
      Other proteins in same PDB: d1pj3a2, d1pj3b2, d1pj3c2, d1pj3d2
      complexed with fum, mn, nad, pyr
      has additional subdomain(s) that are not in the common domain
    2. 2845364Domain d1pj3b1: 1pj3 B:1280-1573 [94728]
      Other proteins in same PDB: d1pj3a2, d1pj3b2, d1pj3c2, d1pj3d2
      complexed with fum, mn, nad, pyr
      has additional subdomain(s) that are not in the common domain
    3. 2845365Domain d1pj3c1: 1pj3 C:2280-2573 [94730]
      Other proteins in same PDB: d1pj3a2, d1pj3b2, d1pj3c2, d1pj3d2
      complexed with fum, mn, nad, pyr
      has additional subdomain(s) that are not in the common domain
    4. 2845366Domain d1pj3d1: 1pj3 D:3280-3573 [94732]
      Other proteins in same PDB: d1pj3a2, d1pj3b2, d1pj3c2, d1pj3d2
      complexed with fum, mn, nad, pyr
      has additional subdomain(s) that are not in the common domain
  8. Domain(s) for 1pj4:
    1. 2845371Domain d1pj4a1: 1pj4 A:280-573 [94734]
      Other proteins in same PDB: d1pj4a2, d1pj4b2, d1pj4c2, d1pj4d2
      complexed with atp, fum, mlt, mn
      has additional subdomain(s) that are not in the common domain
    2. 2845372Domain d1pj4b1: 1pj4 B:1280-1573 [94736]
      Other proteins in same PDB: d1pj4a2, d1pj4b2, d1pj4c2, d1pj4d2
      complexed with atp, fum, mlt, mn
      has additional subdomain(s) that are not in the common domain
    3. 2845373Domain d1pj4c1: 1pj4 C:2280-2573 [94738]
      Other proteins in same PDB: d1pj4a2, d1pj4b2, d1pj4c2, d1pj4d2
      complexed with atp, fum, mlt, mn
      has additional subdomain(s) that are not in the common domain
    4. 2845374Domain d1pj4d1: 1pj4 D:3280-3573 [94740]
      Other proteins in same PDB: d1pj4a2, d1pj4b2, d1pj4c2, d1pj4d2
      complexed with atp, fum, mlt, mn
      has additional subdomain(s) that are not in the common domain
  9. Domain(s) for 1pjl:
    1. 2845397Domain d1pjla1: 1pjl A:280-573 [88123]
      Other proteins in same PDB: d1pjla2, d1pjlb2, d1pjlc2, d1pjld2, d1pjle2, d1pjlf2, d1pjlg2, d1pjlh2
      complexed with lu, nad
      has additional subdomain(s) that are not in the common domain
    2. 2845398Domain d1pjlb1: 1pjl B:1280-1573 [88125]
      Other proteins in same PDB: d1pjla2, d1pjlb2, d1pjlc2, d1pjld2, d1pjle2, d1pjlf2, d1pjlg2, d1pjlh2
      complexed with lu, nad
      has additional subdomain(s) that are not in the common domain
    3. 2845399Domain d1pjlc1: 1pjl C:2280-2573 [88127]
      Other proteins in same PDB: d1pjla2, d1pjlb2, d1pjlc2, d1pjld2, d1pjle2, d1pjlf2, d1pjlg2, d1pjlh2
      complexed with lu, nad
      has additional subdomain(s) that are not in the common domain
    4. 2845400Domain d1pjld1: 1pjl D:3280-3573 [88129]
      Other proteins in same PDB: d1pjla2, d1pjlb2, d1pjlc2, d1pjld2, d1pjle2, d1pjlf2, d1pjlg2, d1pjlh2
      complexed with lu, nad
      has additional subdomain(s) that are not in the common domain
    5. 2845401Domain d1pjle1: 1pjl E:4280-4573 [88131]
      Other proteins in same PDB: d1pjla2, d1pjlb2, d1pjlc2, d1pjld2, d1pjle2, d1pjlf2, d1pjlg2, d1pjlh2
      complexed with lu, nad
      has additional subdomain(s) that are not in the common domain
    6. 2845402Domain d1pjlf1: 1pjl F:5280-5573 [88133]
      Other proteins in same PDB: d1pjla2, d1pjlb2, d1pjlc2, d1pjld2, d1pjle2, d1pjlf2, d1pjlg2, d1pjlh2
      complexed with lu, nad
      has additional subdomain(s) that are not in the common domain
    7. 2845403Domain d1pjlg1: 1pjl G:6280-6573 [88135]
      Other proteins in same PDB: d1pjla2, d1pjlb2, d1pjlc2, d1pjld2, d1pjle2, d1pjlf2, d1pjlg2, d1pjlh2
      complexed with lu, nad
      has additional subdomain(s) that are not in the common domain
    8. 2845404Domain d1pjlh1: 1pjl H:7280-7573 [88137]
      Other proteins in same PDB: d1pjla2, d1pjlb2, d1pjlc2, d1pjld2, d1pjle2, d1pjlf2, d1pjlg2, d1pjlh2
      complexed with lu, nad
      has additional subdomain(s) that are not in the common domain
  10. Domain(s) for 1qr6:
    1. 2845375Domain d1qr6a1: 1qr6 A:280-573 [30293]
      Other proteins in same PDB: d1qr6a2, d1qr6b2
      complexed with nad
      has additional subdomain(s) that are not in the common domain
    2. 2845376Domain d1qr6b1: 1qr6 B:1280-1573 [30294]
      Other proteins in same PDB: d1qr6a2, d1qr6b2
      complexed with nad
      has additional subdomain(s) that are not in the common domain

More info for Species Human (Homo sapiens) [TaxId:9606] from c.2.1.7 Mitochondrial NAD(P)-dependent malic enzyme

Timeline for Species Human (Homo sapiens) [TaxId:9606] from c.2.1.7 Mitochondrial NAD(P)-dependent malic enzyme: