SCOP 1.71: Species: Thermotoga maritima

Lineage for Species: Thermotoga maritima

Root: SCOP 1.71
Class c: Alpha and beta proteins (a/b) [51349] (134 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (12 families)

Family c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain [51883] (11 proteins)
extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site

Protein Glutamate dehydrogenase [51884] (8 species)
Species Thermotoga maritima [TaxId:243274] [51888] (3 PDB entries)

PDB entries in Species: Thermotoga maritima:

Domain(s) for 1b26:
1. Domain d1b26a1: 1b26 A:179-412 [30232]
  Other proteins in same PDB: d1b26a2, d1b26b2, d1b26c2, d1b26d2, d1b26e2, d1b26f2
2. Domain d1b26b1: 1b26 B:179-412 [30233]
  Other proteins in same PDB: d1b26a2, d1b26b2, d1b26c2, d1b26d2, d1b26e2, d1b26f2
3. Domain d1b26c1: 1b26 C:179-412 [30234]
  Other proteins in same PDB: d1b26a2, d1b26b2, d1b26c2, d1b26d2, d1b26e2, d1b26f2
4. Domain d1b26d1: 1b26 D:179-412 [30235]
  Other proteins in same PDB: d1b26a2, d1b26b2, d1b26c2, d1b26d2, d1b26e2, d1b26f2
5. Domain d1b26e1: 1b26 E:179-412 [30236]
  Other proteins in same PDB: d1b26a2, d1b26b2, d1b26c2, d1b26d2, d1b26e2, d1b26f2
6. Domain d1b26f1: 1b26 F:179-412 [30237]
  Other proteins in same PDB: d1b26a2, d1b26b2, d1b26c2, d1b26d2, d1b26e2, d1b26f2
Domain(s) for 1b3b:
1. Domain d1b3ba1: 1b3b A:179-412 [30244]
  Other proteins in same PDB: d1b3ba2, d1b3bb2, d1b3bc2, d1b3bd2, d1b3be2, d1b3bf2
2. Domain d1b3bb1: 1b3b B:179-412 [30245]
  Other proteins in same PDB: d1b3ba2, d1b3bb2, d1b3bc2, d1b3bd2, d1b3be2, d1b3bf2
3. Domain d1b3bc1: 1b3b C:179-412 [30246]
  Other proteins in same PDB: d1b3ba2, d1b3bb2, d1b3bc2, d1b3bd2, d1b3be2, d1b3bf2
4. Domain d1b3bd1: 1b3b D:179-412 [30247]
  Other proteins in same PDB: d1b3ba2, d1b3bb2, d1b3bc2, d1b3bd2, d1b3be2, d1b3bf2
5. Domain d1b3be1: 1b3b E:179-412 [30248]
  Other proteins in same PDB: d1b3ba2, d1b3bb2, d1b3bc2, d1b3bd2, d1b3be2, d1b3bf2
6. Domain d1b3bf1: 1b3b F:179-412 [30249]
  Other proteins in same PDB: d1b3ba2, d1b3bb2, d1b3bc2, d1b3bd2, d1b3be2, d1b3bf2
Domain(s) for 2tmg:
1. Domain d2tmga1: 2tmg A:179-411 [30238]
  Other proteins in same PDB: d2tmga2, d2tmgb2, d2tmgc2, d2tmgd2, d2tmge2, d2tmgf2
2. Domain d2tmgb1: 2tmg B:179-411 [30239]
  Other proteins in same PDB: d2tmga2, d2tmgb2, d2tmgc2, d2tmgd2, d2tmge2, d2tmgf2
3. Domain d2tmgc1: 2tmg C:179-411 [30240]
  Other proteins in same PDB: d2tmga2, d2tmgb2, d2tmgc2, d2tmgd2, d2tmge2, d2tmgf2
4. Domain d2tmgd1: 2tmg D:179-411 [30241]
  Other proteins in same PDB: d2tmga2, d2tmgb2, d2tmgc2, d2tmgd2, d2tmge2, d2tmgf2
5. Domain d2tmge1: 2tmg E:179-411 [30242]
  Other proteins in same PDB: d2tmga2, d2tmgb2, d2tmgc2, d2tmgd2, d2tmge2, d2tmgf2
6. Domain d2tmgf1: 2tmg F:179-411 [30243]
  Other proteins in same PDB: d2tmga2, d2tmgb2, d2tmgc2, d2tmgd2, d2tmge2, d2tmgf2

More info for Species Thermotoga maritima [TaxId:243274] from c.2.1.7 Glutamate dehydrogenase

Timeline for Species Thermotoga maritima [TaxId:243274] from c.2.1.7 Glutamate dehydrogenase:

Species Thermotoga maritima [TaxId:243274] from c.2.1.7 Glutamate dehydrogenase first appeared (with stable ids) in SCOP 1.55
Species Thermotoga maritima [TaxId:243274] from c.2.1.7 Glutamate dehydrogenase appears in SCOP 1.69
Species Thermotoga maritima [TaxId:243274] from c.2.1.7 Glutamate dehydrogenase is called Species Thermotoga maritima [TaxId:2336] from c.2.1.7 Glutamate dehydrogenase in SCOP 1.73
Species Thermotoga maritima [TaxId:243274] from c.2.1.7 Glutamate dehydrogenase appears in the current release, SCOPe 2.08, called Species Thermotoga maritima [TaxId:2336] from c.2.1.7 Glutamate dehydrogenase