Lineage for Family c.2.1.5: LDH N-terminal domain-like

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1346342Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 1346343Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 1348919Family c.2.1.5: LDH N-terminal domain-like [51848] (9 proteins)

Proteins:

  1. 13489206-phospho-beta-glucosidase [110428] (2 species)
    1. 1348921Species Bacillus stearothermophilus [TaxId:1422] [110429] (1 PDB entry)
      Uniprot P84135
    2. 1348923Species Thermotoga maritima [TaxId:2336] [110430] (3 PDB entries)
      Uniprot Q9X108
  2. 1348948Alpha-glucosidase AglA [89530] (1 species)
  3. 1348952L-2-hydroxyisocapronate dehydrogenase, L-HICDH [51857] (1 species)
  4. 1348958Lactate dehydrogenase [51859] (17 species)
    1. 1348959Species Bacillus stearothermophilus [TaxId:1422] [51864] (3 PDB entries)
    2. 1348976Species Bifidobacterium longum, strain am101-2 [TaxId:216816] [51866] (2 PDB entries)
    3. 1348981Species Clostridium thermocellum [TaxId:1515] [117432] (1 PDB entry)
      Uniprot Q4CDK5
    4. 1348983Species Cryptosporidium parvum [TaxId:5807] [225185] (4 PDB entries)
    5. 1348994Species Dogfish (Squalus acanthias) [TaxId:7797] [51862] (3 PDB entries)
    6. 1348998Species Human (Homo sapiens), heart isoform (H chain) [TaxId:9606] [63939] (2 PDB entries)
    7. 1349005Species Human (Homo sapiens), muscle isoform (M chain) [TaxId:9606] [63940] (3 PDB entries)
    8. 1349022Species Lactobacillus casei [TaxId:1582] [51865] (6 PDB entries)
    9. 1349052Species Lactobacillus pentosus [TaxId:1589] [69418] (1 PDB entry)
    10. 1349057Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [51863] (17 PDB entries)
    11. 1349078Species Mouse (Mus musculus) [TaxId:10090] [51861] (1 PDB entry)
    12. 1349083Species Pig (Sus scrofa) [TaxId:9823] [51860] (3 PDB entries)
    13. 1349090Species Plasmodium berghei [TaxId:5821] [102165] (1 PDB entry)
    14. 1349093Species Plasmodium vivax [TaxId:5855] [225043] (2 PDB entries)
    15. 1349102Species Thermotoga maritima [TaxId:2336] [51867] (1 PDB entry)
    16. 1349104Species Thermus caldophilus [TaxId:272] [226614] (2 PDB entries)
    17. 1349113Species Toxoplasma gondii [TaxId:5811] [102166] (5 PDB entries)
  5. 1349129Malate dehydrogenase [51849] (13 species)
    1. 1349130Species Aquaspirillum arcticum [TaxId:87645] [51856] (3 PDB entries)
    2. 1349134Species Archaeoglobus fulgidus [TaxId:2234] [110427] (2 PDB entries)
      Uniprot O08349
    3. 1349137Species Chlorobium tepidum [TaxId:1097] [69416] (1 PDB entry)
    4. 1349140Species Chlorobium vibrioforme [TaxId:1098] [69417] (2 PDB entries)
    5. 1349149Species Chloroflexus aurantiacus [TaxId:1108] [69415] (7 PDB entries)
      Uniprot P80040
    6. 1349164Species Chloroflexus sp. [TaxId:480224] [236527] (1 PDB entry)
    7. 1349167Species Escherichia coli [TaxId:562] [51853] (4 PDB entries)
    8. 1349178Species Flaveria bidentis, chloroplast [TaxId:4224] [51852] (1 PDB entry)
    9. 1349180Species Haloarcula marismortui [TaxId:2238] [51855] (5 PDB entries)
    10. 1349193Species Pig (Sus scrofa) [TaxId:9823] [51850] (3 PDB entries)
    11. 1349202Species Sorghum (Sorghum vulgare), chloroplast [TaxId:4558] [51851] (1 PDB entry)
    12. 1349207Species Thermus flavus [TaxId:274] [51854] (2 PDB entries)
    13. 1349212Species Thermus thermophilus [TaxId:274] [82300] (7 PDB entries)
      identical sequence to that from the Thermus flavus enzyme
  6. 1349229Maltose-6'-phosphate glucosidase GlvA [102169] (1 species)
  7. 1349232MJ0490, lactate/malate dehydrogenase [63941] (1 species)
  8. 1349237Putative alpha-glucosidase TM0752 [102167] (1 species)
  9. 1349240automated matches [226881] (5 species)
    not a true protein
    1. 1349241Species Chloroflexus aurantiacus [TaxId:1108] [226645] (1 PDB entry)
    2. 1349244Species Haloarcula marismortui [TaxId:2238] [225147] (4 PDB entries)
    3. 1349261Species Human (Homo sapiens) [TaxId:9606] [225056] (1 PDB entry)
    4. 1349266Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [225718] (5 PDB entries)
    5. Species Toxoplasma gondii [TaxId:5811] [233099] (1 PDB entry)

More info for Family c.2.1.5: LDH N-terminal domain-like

Timeline for Family c.2.1.5: LDH N-terminal domain-like: