Lineage for Protein: Phosphoglycerate dehydrogenase

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2090218Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2090219Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2092885Family c.2.1.4: Formate/glycerate dehydrogenases, NAD-domain [51830] (10 protein domains)
    this domain interrupts the other domain which defines family
  6. 2092956Protein Phosphoglycerate dehydrogenase [51839] (2 species)
    has additional C-terminal domain of the ferredoxin fold

Species:

  1. 2092957Escherichia coli [TaxId:562] [51840] (7 PDB entries)
    1. Domains for 1psd:
      1. 2092966Domain d1psda1: 1psd A:108-295 [30097]
        Other proteins in same PDB: d1psda2, d1psda3, d1psdb2, d1psdb3
        complexed with nad, ser
      2. 2092967Domain d1psdb1: 1psd B:108-295 [30098]
        Other proteins in same PDB: d1psda2, d1psda3, d1psdb2, d1psdb3
        complexed with nad, ser
    2. Domains for 1sc6:
      1. 2092958Domain d1sc6a1: 1sc6 A:108-295 [118932]
        Other proteins in same PDB: d1sc6a2, d1sc6a3, d1sc6b2, d1sc6b3, d1sc6c2, d1sc6c3, d1sc6d2, d1sc6d3
        automatically matched to d1psda1
        complexed with nad
      2. 2092959Domain d1sc6b1: 1sc6 B:108-295 [118935]
        Other proteins in same PDB: d1sc6a2, d1sc6a3, d1sc6b2, d1sc6b3, d1sc6c2, d1sc6c3, d1sc6d2, d1sc6d3
        automatically matched to d1psda1
        complexed with nad
      3. 2092960Domain d1sc6c1: 1sc6 C:108-291 [118938]
        Other proteins in same PDB: d1sc6a2, d1sc6a3, d1sc6b2, d1sc6b3, d1sc6c2, d1sc6c3, d1sc6d2, d1sc6d3
        automatically matched to d1psda1
        complexed with nad
      4. 2092961Domain d1sc6d1: 1sc6 D:108-291 [118941]
        Other proteins in same PDB: d1sc6a2, d1sc6a3, d1sc6b2, d1sc6b3, d1sc6c2, d1sc6c3, d1sc6d2, d1sc6d3
        automatically matched to d1psda1
        complexed with nad
    3. Domains for 1yba:
      1. 2092962Domain d1ybaa1: 1yba A:108-295 [122872]
        Other proteins in same PDB: d1ybaa2, d1ybaa3, d1ybab2, d1ybab3, d1ybac2, d1ybac3, d1ybad2, d1ybad3
        automatically matched to d1psda1
        complexed with akg, nad, po4, unl
      2. 2092963Domain d1ybab1: 1yba B:108-295 [122875]
        Other proteins in same PDB: d1ybaa2, d1ybaa3, d1ybab2, d1ybab3, d1ybac2, d1ybac3, d1ybad2, d1ybad3
        automatically matched to d1psda1
        complexed with akg, nad, po4, unl
      3. 2092964Domain d1ybac1: 1yba C:108-295 [122878]
        Other proteins in same PDB: d1ybaa2, d1ybaa3, d1ybab2, d1ybab3, d1ybac2, d1ybac3, d1ybad2, d1ybad3
        automatically matched to d1psda1
        complexed with akg, nad, po4, unl
      4. 2092965Domain d1ybad1: 1yba D:108-295 [122881]
        Other proteins in same PDB: d1ybaa2, d1ybaa3, d1ybab2, d1ybab3, d1ybac2, d1ybac3, d1ybad2, d1ybad3
        automatically matched to d1psda1
        complexed with akg, nad, po4, unl
    4. Domains for 2p9c:
      1. 2092968Domain d2p9ca1: 2p9c A:108-295 [139556]
        Other proteins in same PDB: d2p9ca2, d2p9ca3, d2p9cb2, d2p9cb3
        automatically matched to d1psda1
        complexed with nai, ser; mutant
      2. 2092969Domain d2p9cb1: 2p9c B:108-295 [139559]
        Other proteins in same PDB: d2p9ca2, d2p9ca3, d2p9cb2, d2p9cb3
        automatically matched to d1psda1
        complexed with nai, ser; mutant
    5. Domains for 2p9e:
      1. 2092970Domain d2p9ea1: 2p9e A:108-295 [139562]
        Other proteins in same PDB: d2p9ea2, d2p9ea3, d2p9eb2, d2p9eb3, d2p9ec2, d2p9ec3, d2p9ed2, d2p9ed3
        automatically matched to d1psda1
        complexed with cit, nai, po4, so4; mutant
      2. 2092971Domain d2p9eb1: 2p9e B:108-295 [139565]
        Other proteins in same PDB: d2p9ea2, d2p9ea3, d2p9eb2, d2p9eb3, d2p9ec2, d2p9ec3, d2p9ed2, d2p9ed3
        automatically matched to d1psda1
        complexed with cit, nai, po4, so4; mutant
      3. 2092972Domain d2p9ec1: 2p9e C:108-295 [139568]
        Other proteins in same PDB: d2p9ea2, d2p9ea3, d2p9eb2, d2p9eb3, d2p9ec2, d2p9ec3, d2p9ed2, d2p9ed3
        automatically matched to d1psda1
        complexed with cit, nai, po4, so4; mutant
      4. 2092973Domain d2p9ed1: 2p9e D:108-295 [139571]
        Other proteins in same PDB: d2p9ea2, d2p9ea3, d2p9eb2, d2p9eb3, d2p9ec2, d2p9ec3, d2p9ed2, d2p9ed3
        automatically matched to d1psda1
        complexed with cit, nai, po4, so4; mutant
    6. Domains for 2p9g:
      1. 2092974Domain d2p9ga1: 2p9g A:108-295 [139574]
        Other proteins in same PDB: d2p9ga2, d2p9ga3, d2p9gb2, d2p9gb3
        automatically matched to d1psda1
        complexed with nai, ser; mutant
      2. 2092975Domain d2p9gb1: 2p9g B:108-295 [139577]
        Other proteins in same PDB: d2p9ga2, d2p9ga3, d2p9gb2, d2p9gb3
        automatically matched to d1psda1
        complexed with nai, ser; mutant
    7. Domain for 2pa3:
  2. 2092977Mycobacterium tuberculosis [TaxId:1773] [141927] (2 PDB entries)
    Uniprot P0A544 98-281
    1. Domains for 1ygy:
      1. 2092978Domain d1ygya1: 1ygy A:99-282 [123150]
        Other proteins in same PDB: d1ygya2, d1ygya3, d1ygya4, d1ygyb2, d1ygyb3, d1ygyb4
        complexed with tar
      2. 2092979Domain d1ygyb1: 1ygy B:99-282 [123154]
        Other proteins in same PDB: d1ygya2, d1ygya3, d1ygya4, d1ygyb2, d1ygyb3, d1ygyb4
        automated match to d1ygya1
        complexed with tar
    2. Domains for 3dc2:
      1. 2092980Domain d3dc2a2: 3dc2 A:99-282 [209072]
        Other proteins in same PDB: d3dc2a1, d3dc2a3, d3dc2a4, d3dc2b1, d3dc2b3, d3dc2b4
        automated match to d1ygya1
        complexed with ser, tla
      2. 2092981Domain d3dc2b2: 3dc2 B:99-282 [209076]
        Other proteins in same PDB: d3dc2a1, d3dc2a3, d3dc2a4, d3dc2b1, d3dc2b3, d3dc2b4
        automated match to d1ygya1
        complexed with ser, tla

More info for Protein Phosphoglycerate dehydrogenase from c.2.1.4: Formate/glycerate dehydrogenases, NAD-domain

Timeline for Protein Phosphoglycerate dehydrogenase from c.2.1.4: Formate/glycerate dehydrogenases, NAD-domain: