SCOPe 2.05: Species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Lineage for Species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)
Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 proteins)
family members also share a common alpha+beta fold in C-terminal domain
Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (19 species)
Species Trypanosome (Leishmania mexicana) [TaxId:5665] [51809] (5 PDB entries)

PDB entries in Species: Trypanosome (Leishmania mexicana) [TaxId: 5665]:

Domain(s) for 1a7k:
1. Domain d1a7ka1: 1a7k A:1-165,A:335-358 [30008]
  Other proteins in same PDB: d1a7ka2, d1a7kb2, d1a7kc2, d1a7kd2
  complexed with nad, po4
2. Domain d1a7kb1: 1a7k B:1-165,B:335-358 [30009]
  Other proteins in same PDB: d1a7ka2, d1a7kb2, d1a7kc2, d1a7kd2
  complexed with nad, po4
3. Domain d1a7kc1: 1a7k C:1-165,C:335-358 [30010]
  Other proteins in same PDB: d1a7ka2, d1a7kb2, d1a7kc2, d1a7kd2
  complexed with nad, po4
4. Domain d1a7kd1: 1a7k D:1-165,D:335-358 [30011]
  Other proteins in same PDB: d1a7ka2, d1a7kb2, d1a7kc2, d1a7kd2
  complexed with nad, po4
Domain(s) for 1gyp:
1. Domain d1gypa1: 1gyp A:1-165,A:335-358 [30004]
  Other proteins in same PDB: d1gypa2, d1gypb2, d1gypc2, d1gypd2
  complexed with nad, po4
2. Domain d1gypb1: 1gyp B:1-165,B:335-358 [30005]
  Other proteins in same PDB: d1gypa2, d1gypb2, d1gypc2, d1gypd2
  complexed with nad, po4
3. Domain d1gypc1: 1gyp C:1-165,C:335-358 [30006]
  Other proteins in same PDB: d1gypa2, d1gypb2, d1gypc2, d1gypd2
  complexed with nad, po4
4. Domain d1gypd1: 1gyp D:1-165,D:335-358 [30007]
  Other proteins in same PDB: d1gypa2, d1gypb2, d1gypc2, d1gypd2
  complexed with nad, po4
Domain(s) for 1gyq:
1. Domain d1gyqa1: 1gyq A:1-165,A:335-358 [30012]
  Other proteins in same PDB: d1gyqa2, d1gyqb2, d1gyqc2, d1gyqd2
  complexed with nbd
2. Domain d1gyqb1: 1gyq B:1-165,B:335-358 [30013]
  Other proteins in same PDB: d1gyqa2, d1gyqb2, d1gyqc2, d1gyqd2
  complexed with nbd
3. Domain d1gyqc1: 1gyq C:1-165,C:335-358 [30014]
  Other proteins in same PDB: d1gyqa2, d1gyqb2, d1gyqc2, d1gyqd2
  complexed with nbd
4. Domain d1gyqd1: 1gyq D:1-165,D:335-358 [30015]
  Other proteins in same PDB: d1gyqa2, d1gyqb2, d1gyqc2, d1gyqd2
  complexed with nbd
Domain(s) for 1i32:
1. Domain d1i32a1: 1i32 A:1-165,A:335-358 [65993]
  Other proteins in same PDB: d1i32a2, d1i32b2, d1i32c2, d1i32d2, d1i32e2, d1i32f2
  complexed with nmd
2. Domain d1i32b1: 1i32 B:1-165,B:335-358 [65995]
  Other proteins in same PDB: d1i32a2, d1i32b2, d1i32c2, d1i32d2, d1i32e2, d1i32f2
  complexed with nmd
3. Domain d1i32c1: 1i32 C:1-165,C:335-358 [65997]
  Other proteins in same PDB: d1i32a2, d1i32b2, d1i32c2, d1i32d2, d1i32e2, d1i32f2
  complexed with nmd
4. Domain d1i32d1: 1i32 D:1-165,D:335-358 [65999]
  Other proteins in same PDB: d1i32a2, d1i32b2, d1i32c2, d1i32d2, d1i32e2, d1i32f2
  complexed with nmd
5. Domain d1i32e1: 1i32 E:1-165,E:335-358 [66001]
  Other proteins in same PDB: d1i32a2, d1i32b2, d1i32c2, d1i32d2, d1i32e2, d1i32f2
  complexed with nmd
6. Domain d1i32f1: 1i32 F:1-165,F:335-358 [66003]
  Other proteins in same PDB: d1i32a2, d1i32b2, d1i32c2, d1i32d2, d1i32e2, d1i32f2
  complexed with nmd
Domain(s) for 1i33:
1. Domain d1i33a1: 1i33 A:1-165,A:335-358 [66005]
  Other proteins in same PDB: d1i33a2, d1i33b2, d1i33c2, d1i33d2, d1i33e2, d1i33f2
  complexed with tnd
2. Domain d1i33b1: 1i33 B:1-165,B:335-358 [66007]
  Other proteins in same PDB: d1i33a2, d1i33b2, d1i33c2, d1i33d2, d1i33e2, d1i33f2
  complexed with tnd
3. Domain d1i33c1: 1i33 C:1-165,C:335-358 [66009]
  Other proteins in same PDB: d1i33a2, d1i33b2, d1i33c2, d1i33d2, d1i33e2, d1i33f2
  complexed with tnd
4. Domain d1i33d1: 1i33 D:1-165,D:335-358 [66011]
  Other proteins in same PDB: d1i33a2, d1i33b2, d1i33c2, d1i33d2, d1i33e2, d1i33f2
  complexed with tnd
5. Domain d1i33e1: 1i33 E:1-165,E:335-358 [66013]
  Other proteins in same PDB: d1i33a2, d1i33b2, d1i33c2, d1i33d2, d1i33e2, d1i33f2
  complexed with tnd
6. Domain d1i33f1: 1i33 F:1-165,F:335-358 [66015]
  Other proteins in same PDB: d1i33a2, d1i33b2, d1i33c2, d1i33d2, d1i33e2, d1i33f2
  complexed with tnd

More info for Species Trypanosome (Leishmania mexicana) [TaxId:5665] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)

Timeline for Species Trypanosome (Leishmania mexicana) [TaxId:5665] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH):

Species Trypanosome (Leishmania mexicana) [TaxId:5665] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) first appeared (with stable ids) in SCOP 1.55, called Species Leishmania mexicana [TaxId:5665] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Species Trypanosome (Leishmania mexicana) [TaxId:5665] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) appears in SCOPe 2.04
Species Trypanosome (Leishmania mexicana) [TaxId:5665] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) appears in SCOPe 2.06
Species Trypanosome (Leishmania mexicana) [TaxId:5665] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) appears in the current release, SCOPe 2.08