Lineage for Protein: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)

  1. Root: SCOP 1.59
  2. 115903Class c: Alpha and beta proteins (a/b) [51349] (113 folds)
  3. 117972Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
  4. 117973Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (10 families) (S)
  5. 118409Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (10 proteins)
  6. 118495Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (12 species)

Species:

  1. 118496Archaeon Methanothermus fervidus [TaxId:2180] [51807] (1 PDB entry)
  2. 118501Archaeon Sulfolobus solfataricus [TaxId:2287] [51806] (1 PDB entry)
  3. 118504Bacillus stearothermophilus, nca 1503 [TaxId:1422] [51803] (6 PDB entries)
    1. Domains for 1dbv:
      1. 118509Domain d1dbvo1: 1dbv O:0-148,O:313-333 [29966]
        Other proteins in same PDB: d1dbvo2, d1dbvp2, d1dbvq2, d1dbvr2
      2. 118510Domain d1dbvp1: 1dbv P:0-148,P:313-333 [29967]
        Other proteins in same PDB: d1dbvo2, d1dbvp2, d1dbvq2, d1dbvr2
      3. 118511Domain d1dbvq1: 1dbv Q:0-148,Q:313-333 [29968]
        Other proteins in same PDB: d1dbvo2, d1dbvp2, d1dbvq2, d1dbvr2
      4. 118512Domain d1dbvr1: 1dbv R:0-148,R:313-333 [29969]
        Other proteins in same PDB: d1dbvo2, d1dbvp2, d1dbvq2, d1dbvr2
    2. Domains for 1gd1:
      1. 118505Domain d1gd1o1: 1gd1 O:0-148,O:313-333 [29962]
        Other proteins in same PDB: d1gd1o2, d1gd1p2, d1gd1q2, d1gd1r2
      2. 118506Domain d1gd1p1: 1gd1 P:0-148,P:313-333 [29963]
        Other proteins in same PDB: d1gd1o2, d1gd1p2, d1gd1q2, d1gd1r2
      3. 118507Domain d1gd1q1: 1gd1 Q:0-148,Q:313-333 [29964]
        Other proteins in same PDB: d1gd1o2, d1gd1p2, d1gd1q2, d1gd1r2
      4. 118508Domain d1gd1r1: 1gd1 R:0-148,R:313-333 [29965]
        Other proteins in same PDB: d1gd1o2, d1gd1p2, d1gd1q2, d1gd1r2
    3. Domains for 2dbv:
      1. 118513Domain d2dbvo1: 2dbv O:0-148,O:313-333 [29970]
        Other proteins in same PDB: d2dbvo2, d2dbvp2, d2dbvq2, d2dbvr2
      2. 118514Domain d2dbvp1: 2dbv P:0-148,P:313-333 [29971]
        Other proteins in same PDB: d2dbvo2, d2dbvp2, d2dbvq2, d2dbvr2
      3. 118515Domain d2dbvq1: 2dbv Q:0-148,Q:313-333 [29972]
        Other proteins in same PDB: d2dbvo2, d2dbvp2, d2dbvq2, d2dbvr2
      4. 118516Domain d2dbvr1: 2dbv R:0-148,R:313-333 [29973]
        Other proteins in same PDB: d2dbvo2, d2dbvp2, d2dbvq2, d2dbvr2
    4. Domains for 2gd1:
      1. 118521Domain d2gd1o1: 2gd1 O:0-148,O:313-333 [29978]
        Other proteins in same PDB: d2gd1o2, d2gd1p2, d2gd1q2, d2gd1r2
      2. 118522Domain d2gd1p1: 2gd1 P:0-148,P:313-333 [29979]
        Other proteins in same PDB: d2gd1o2, d2gd1p2, d2gd1q2, d2gd1r2
      3. 118523Domain d2gd1q1: 2gd1 Q:0-148,Q:313-333 [29980]
        Other proteins in same PDB: d2gd1o2, d2gd1p2, d2gd1q2, d2gd1r2
      4. 118524Domain d2gd1r1: 2gd1 R:0-148,R:313-333 [29981]
        Other proteins in same PDB: d2gd1o2, d2gd1p2, d2gd1q2, d2gd1r2
    5. Domains for 3dbv:
      1. 118525Domain d3dbvo1: 3dbv O:0-148,O:313-333 [29982]
        Other proteins in same PDB: d3dbvo2, d3dbvp2, d3dbvq2, d3dbvr2
      2. 118526Domain d3dbvp1: 3dbv P:0-148,P:313-333 [29983]
        Other proteins in same PDB: d3dbvo2, d3dbvp2, d3dbvq2, d3dbvr2
      3. 118527Domain d3dbvq1: 3dbv Q:0-148,Q:313-333 [29984]
        Other proteins in same PDB: d3dbvo2, d3dbvp2, d3dbvq2, d3dbvr2
      4. 118528Domain d3dbvr1: 3dbv R:0-148,R:313-333 [29985]
        Other proteins in same PDB: d3dbvo2, d3dbvp2, d3dbvq2, d3dbvr2
    6. Domains for 4dbv:
      1. 118517Domain d4dbvo1: 4dbv O:0-148,O:313-333 [29974]
        Other proteins in same PDB: d4dbvo2, d4dbvp2, d4dbvq2, d4dbvr2
      2. 118518Domain d4dbvp1: 4dbv P:0-148,P:313-333 [29975]
        Other proteins in same PDB: d4dbvo2, d4dbvp2, d4dbvq2, d4dbvr2
      3. 118519Domain d4dbvq1: 4dbv Q:0-148,Q:313-333 [29976]
        Other proteins in same PDB: d4dbvo2, d4dbvp2, d4dbvq2, d4dbvr2
      4. 118520Domain d4dbvr1: 4dbv R:0-148,R:313-333 [29977]
        Other proteins in same PDB: d4dbvo2, d4dbvp2, d4dbvq2, d4dbvr2
  4. 118529Escherichia coli [TaxId:562] [51802] (6 PDB entries)
    1. Domains for 1dc3:
      1. 118538Domain d1dc3a1: 1dc3 A:0-148,A:313-330 [29958]
        Other proteins in same PDB: d1dc3a2, d1dc3b2
      2. 118539Domain d1dc3b1: 1dc3 B:0-148,B:313-330 [29959]
        Other proteins in same PDB: d1dc3a2, d1dc3b2
    2. Domains for 1dc4:
      1. 118540Domain d1dc4a1: 1dc4 A:0-148,A:313-330 [29960]
        Other proteins in same PDB: d1dc4a2, d1dc4b2
      2. 118541Domain d1dc4b1: 1dc4 B:0-148,B:313-330 [29961]
        Other proteins in same PDB: d1dc4a2, d1dc4b2
    3. Domains for 1dc5:
      1. 118532Domain d1dc5a1: 1dc5 A:0-148,A:313-330 [29952]
        Other proteins in same PDB: d1dc5a2, d1dc5b2
      2. 118533Domain d1dc5b1: 1dc5 B:0-148,B:313-330 [29953]
        Other proteins in same PDB: d1dc5a2, d1dc5b2
    4. Domains for 1dc6:
      1. 118534Domain d1dc6a1: 1dc6 A:0-148,A:313-330 [29956]
        Other proteins in same PDB: d1dc6a2, d1dc6b2
      2. 118535Domain d1dc6b1: 1dc6 B:0-148,B:313-330 [29957]
        Other proteins in same PDB: d1dc6a2, d1dc6b2
    5. Domains for 1gad:
      1. 118530Domain d1gado1: 1gad O:0-148,O:313-330 [29950]
        Other proteins in same PDB: d1gado2, d1gadp2
      2. 118531Domain d1gadp1: 1gad P:0-148,P:313-330 [29951]
        Other proteins in same PDB: d1gado2, d1gadp2
    6. Domains for 1gae:
      1. 118536Domain d1gaeo1: 1gae O:0-148,O:313-330 [29954]
        Other proteins in same PDB: d1gaeo2, d1gaep2
      2. 118537Domain d1gaep1: 1gae P:0-148,P:313-330 [29955]
        Other proteins in same PDB: d1gaeo2, d1gaep2
  5. 118542Human (Homo sapiens) [TaxId:9606] [51812] (1 PDB entry)
  6. 118545Leishmania mexicana [TaxId:5665] [51809] (5 PDB entries)
    1. Domains for 1a7k:
      1. 118556Domain d1a7ka1: 1a7k A:1-165,A:335-358 [30008]
        Other proteins in same PDB: d1a7ka2, d1a7kb2, d1a7kc2, d1a7kd2
      2. 118557Domain d1a7kb1: 1a7k B:1-165,B:335-358 [30009]
        Other proteins in same PDB: d1a7ka2, d1a7kb2, d1a7kc2, d1a7kd2
      3. 118558Domain d1a7kc1: 1a7k C:1-165,C:335-358 [30010]
        Other proteins in same PDB: d1a7ka2, d1a7kb2, d1a7kc2, d1a7kd2
      4. 118559Domain d1a7kd1: 1a7k D:1-165,D:335-358 [30011]
        Other proteins in same PDB: d1a7ka2, d1a7kb2, d1a7kc2, d1a7kd2
    2. Domains for 1gyp:
      1. 118552Domain d1gypa1: 1gyp A:1-165,A:335-358 [30004]
        Other proteins in same PDB: d1gypa2, d1gypb2, d1gypc2, d1gypd2
      2. 118553Domain d1gypb1: 1gyp B:1-165,B:335-358 [30005]
        Other proteins in same PDB: d1gypa2, d1gypb2, d1gypc2, d1gypd2
      3. 118554Domain d1gypc1: 1gyp C:1-165,C:335-358 [30006]
        Other proteins in same PDB: d1gypa2, d1gypb2, d1gypc2, d1gypd2
      4. 118555Domain d1gypd1: 1gyp D:1-165,D:335-358 [30007]
        Other proteins in same PDB: d1gypa2, d1gypb2, d1gypc2, d1gypd2
    3. Domains for 1gyq:
      1. 118566Domain d1gyqa1: 1gyq A:1-165,A:335-358 [30012]
        Other proteins in same PDB: d1gyqa2, d1gyqb2, d1gyqc2, d1gyqd2
      2. 118567Domain d1gyqb1: 1gyq B:1-165,B:335-358 [30013]
        Other proteins in same PDB: d1gyqa2, d1gyqb2, d1gyqc2, d1gyqd2
      3. 118568Domain d1gyqc1: 1gyq C:1-165,C:335-358 [30014]
        Other proteins in same PDB: d1gyqa2, d1gyqb2, d1gyqc2, d1gyqd2
      4. 118569Domain d1gyqd1: 1gyq D:1-165,D:335-358 [30015]
        Other proteins in same PDB: d1gyqa2, d1gyqb2, d1gyqc2, d1gyqd2
    4. Domains for 1i32:
      1. 118546Domain d1i32a1: 1i32 A:1-165,A:335-358 [65993]
        Other proteins in same PDB: d1i32a2, d1i32b2, d1i32c2, d1i32d2, d1i32e2, d1i32f2
      2. 118547Domain d1i32b1: 1i32 B:1-165,B:335-358 [65995]
        Other proteins in same PDB: d1i32a2, d1i32b2, d1i32c2, d1i32d2, d1i32e2, d1i32f2
      3. 118548Domain d1i32c1: 1i32 C:1-165,C:335-358 [65997]
        Other proteins in same PDB: d1i32a2, d1i32b2, d1i32c2, d1i32d2, d1i32e2, d1i32f2
      4. 118549Domain d1i32d1: 1i32 D:1-165,D:335-358 [65999]
        Other proteins in same PDB: d1i32a2, d1i32b2, d1i32c2, d1i32d2, d1i32e2, d1i32f2
      5. 118550Domain d1i32e1: 1i32 E:1-165,E:335-358 [66001]
        Other proteins in same PDB: d1i32a2, d1i32b2, d1i32c2, d1i32d2, d1i32e2, d1i32f2
      6. 118551Domain d1i32f1: 1i32 F:1-165,F:335-358 [66003]
        Other proteins in same PDB: d1i32a2, d1i32b2, d1i32c2, d1i32d2, d1i32e2, d1i32f2
    5. Domains for 1i33:
      1. 118560Domain d1i33a1: 1i33 A:1-165,A:335-358 [66005]
        Other proteins in same PDB: d1i33a2, d1i33b2, d1i33c2, d1i33d2, d1i33e2, d1i33f2
      2. 118561Domain d1i33b1: 1i33 B:1-165,B:335-358 [66007]
        Other proteins in same PDB: d1i33a2, d1i33b2, d1i33c2, d1i33d2, d1i33e2, d1i33f2
      3. 118562Domain d1i33c1: 1i33 C:1-165,C:335-358 [66009]
        Other proteins in same PDB: d1i33a2, d1i33b2, d1i33c2, d1i33d2, d1i33e2, d1i33f2
      4. 118563Domain d1i33d1: 1i33 D:1-165,D:335-358 [66011]
        Other proteins in same PDB: d1i33a2, d1i33b2, d1i33c2, d1i33d2, d1i33e2, d1i33f2
      5. 118564Domain d1i33e1: 1i33 E:1-165,E:335-358 [66013]
        Other proteins in same PDB: d1i33a2, d1i33b2, d1i33c2, d1i33d2, d1i33e2, d1i33f2
      6. 118565Domain d1i33f1: 1i33 F:1-165,F:335-358 [66015]
        Other proteins in same PDB: d1i33a2, d1i33b2, d1i33c2, d1i33d2, d1i33e2, d1i33f2
  7. 118570Lobster (Homarus americanus) [51810] (2 PDB entries)
    1. Domains for 1gpd:
      1. 118575Domain d1gpdg1: 1gpd G:1-148,G:313-334 [30020]
        Other proteins in same PDB: d1gpdg2, d1gpdr2
      2. 118576Domain d1gpdr1: 1gpd R:1-148,R:313-334 [30021]
        Other proteins in same PDB: d1gpdg2, d1gpdr2
    2. Domains for 4gpd:
      1. 118571Domain d4gpd11: 4gpd 1:1-147,1:312-333 [30016]
        Other proteins in same PDB: d4gpd12, d4gpd22, d4gpd32, d4gpd42
      2. 118572Domain d4gpd21: 4gpd 2:1-147,2:312-333 [30017]
        Other proteins in same PDB: d4gpd12, d4gpd22, d4gpd32, d4gpd42
      3. 118573Domain d4gpd31: 4gpd 3:1-147,3:312-333 [30018]
        Other proteins in same PDB: d4gpd12, d4gpd22, d4gpd32, d4gpd42
      4. 118574Domain d4gpd41: 4gpd 4:1-147,4:312-333 [30019]
        Other proteins in same PDB: d4gpd12, d4gpd22, d4gpd32, d4gpd42
  8. 118577Lobster (Palinurus versicolor) [51811] (3 PDB entries)
    1. Domains for 1crw:
      1. 118580Domain d1crwg1: 1crw G:1-148,G:313-334 [30026]
        Other proteins in same PDB: d1crwg2, d1crwr2
      2. 118581Domain d1crwr1: 1crw R:1-148,R:313-334 [30027]
        Other proteins in same PDB: d1crwg2, d1crwr2
    2. Domains for 1dss:
      1. 118578Domain d1dssg1: 1dss G:1-148,G:313-334 [30022]
        Other proteins in same PDB: d1dssg2, d1dssr2
      2. 118579Domain d1dssr1: 1dss R:1-148,R:313-334 [30023]
        Other proteins in same PDB: d1dssg2, d1dssr2
    3. Domains for 1szj:
      1. 118582Domain d1szjg1: 1szj G:1-148,G:313-334 [30024]
        Other proteins in same PDB: d1szjg2, d1szjr2
      2. 118583Domain d1szjr1: 1szj R:1-148,R:313-334 [30025]
        Other proteins in same PDB: d1szjg2, d1szjr2
  9. 118584Spinach (Spinacia oleracea) [TaxId:3562] [69409] (1 PDB entry)
  10. 118588Thermotoga maritima [TaxId:243274] [51805] (1 PDB entry)
  11. 118591Thermus aquaticus [TaxId:271] [51804] (1 PDB entry)
  12. 118596Trypanosoma brucei brucei, glycosome [TaxId:5702] [51808] (1 PDB entry)

More info for Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain

Timeline for Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain:

  • Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain first appeared (with stable ids) in SCOP 1.55
  • Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain appears in SCOP 1.57
  • Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain appears in SCOP 1.61
  • Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain appears in the current release, SCOPe 2.07