SCOPe 2.05: Protein: beta-keto acyl carrier protein reductase

Lineage for Protein: beta-keto acyl carrier protein reductase

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (71 proteins)
also known as short-chain dehydrogenases and SDR family
parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7

Protein beta-keto acyl carrier protein reductase [51788] (8 species)

Species:

Escherichia coli [TaxId:562] [51790] (3 PDB entries)
1. Domains for 1i01:
  1. Domain d1i01a_: 1i01 A: [29897]
  2. Domain d1i01b_: 1i01 B: [29898]
  3. Domain d1i01c_: 1i01 C: [29899]
  4. Domain d1i01d_: 1i01 D: [29900]
  5. Domain d1i01e_: 1i01 E: [29901]
  6. Domain d1i01f_: 1i01 F: [29902]
  7. Domain d1i01g_: 1i01 G: [29903]
  8. Domain d1i01h_: 1i01 H: [29904]
2. Domains for 1q7b:
  1. Domain d1q7ba_: 1q7b A: [96026]
    complexed with ca, nap
  2. Domain d1q7bb_: 1q7b B: [96027]
    complexed with ca, nap
  3. Domain d1q7bc_: 1q7b C: [96028]
    complexed with ca, nap
  4. Domain d1q7bd_: 1q7b D: [96029]
    complexed with ca, nap
3. Domains for 1q7c:
  1. Domain d1q7ca_: 1q7c A: [96030]
    complexed with ndp; mutant
  2. Domain d1q7cb_: 1q7c B: [96031]
    complexed with ndp; mutant
Malaria parasite (Plasmodium falciparum) [TaxId:5833] [141877] (1 PDB entry)
Uniprot Q86RB1 54-304
- Domain for 2c07:
  - Domain d2c07a1: 2c07 A:54-304 [129577]
    complexed with so4
Mycobacterium tuberculosis [TaxId:1773] [141875] (2 PDB entries)
Uniprot P0A5Y4 9-245! Uniprot P0A5Y4 9-247
1. Domain for 1uzl:
  - Domain d1uzla1: 1uzl A:9-247 [119809]
    Other proteins in same PDB: d1uzlb_
    complexed with cs
2. Domain for 1uzm:
  - Domain d1uzma1: 1uzm A:9-245 [119811]
    Other proteins in same PDB: d1uzmb_
    complexed with cs

Oil seed rape (Brassica napus) [TaxId:3708] [51789] (2 PDB entries)

Domain for 1edo:
- Domain d1edoa_: 1edo A: [29896]
  complexed with nap

Domains for 2cdh:

Domain d2cdhg1: 2cdh G:17-260 [130282]
Other proteins in same PDB: d2cdha1, d2cdha2, d2cdhb1, d2cdhb2, d2cdhc1, d2cdhc2, d2cdhd1, d2cdhd2, d2cdhe1, d2cdhe2, d2cdhf1, d2cdhf2, d2cdhs1
automatically matched to d1edoa_

Domain d2cdhh1: 2cdh H:17-260 [130283]
Other proteins in same PDB: d2cdha1, d2cdha2, d2cdhb1, d2cdhb2, d2cdhc1, d2cdhc2, d2cdhd1, d2cdhd2, d2cdhe1, d2cdhe2, d2cdhf1, d2cdhf2, d2cdhs1
automatically matched to d1edoa_

Domain d2cdhi1: 2cdh I:17-260 [130284]
Other proteins in same PDB: d2cdha1, d2cdha2, d2cdhb1, d2cdhb2, d2cdhc1, d2cdhc2, d2cdhd1, d2cdhd2, d2cdhe1, d2cdhe2, d2cdhf1, d2cdhf2, d2cdhs1
automatically matched to d1edoa_

Domain d2cdhj1: 2cdh J:17-260 [130285]
Other proteins in same PDB: d2cdha1, d2cdha2, d2cdhb1, d2cdhb2, d2cdhc1, d2cdhc2, d2cdhd1, d2cdhd2, d2cdhe1, d2cdhe2, d2cdhf1, d2cdhf2, d2cdhs1
automatically matched to d1edoa_

Domain d2cdhk1: 2cdh K:17-260 [130286]
Other proteins in same PDB: d2cdha1, d2cdha2, d2cdhb1, d2cdhb2, d2cdhc1, d2cdhc2, d2cdhd1, d2cdhd2, d2cdhe1, d2cdhe2, d2cdhf1, d2cdhf2, d2cdhs1
automatically matched to d1edoa_

Domain d2cdhl1: 2cdh L:17-260 [130287]
Other proteins in same PDB: d2cdha1, d2cdha2, d2cdhb1, d2cdhb2, d2cdhc1, d2cdhc2, d2cdhd1, d2cdhd2, d2cdhe1, d2cdhe2, d2cdhf1, d2cdhf2, d2cdhs1
automatically matched to d1edoa_

Streptomyces coelicolor [TaxId:1902] [117408] (8 PDB entries)
Uniprot P16544 #SP
1. Domains for 1w4z:
  1. Domain d1w4za_: 1w4z A: [114195]
    complexed with fmt, nap
  2. Domain d1w4zb_: 1w4z B: [114196]
    complexed with fmt, nap
2. Domains for 1x7g:
  1. Domain d1x7ga_: 1x7g A: [114929]
    complexed with nap
  2. Domain d1x7gb_: 1x7g B: [114930]
    complexed with nap
3. Domains for 1x7h:
  1. Domain d1x7ha_: 1x7h A: [114931]
    complexed with ndp
  2. Domain d1x7hb_: 1x7h B: [114932]
    complexed with ndp
4. Domains for 1xr3:
  1. Domain d1xr3a1: 1xr3 A:6-261 [122245]
    complexed with isz, nap
  2. Domain d1xr3b_: 1xr3 B: [122246]
    automated match to d1x7gb_
    complexed with isz, nap
5. Domains for 2rh4:
  1. Domain d2rh4a_: 2rh4 A: [152028]
    automated match to d1w4zb_
    complexed with emo, ndp
  2. Domain d2rh4b_: 2rh4 B: [152029]
    automated match to d1w4zb_
    complexed with emo, ndp
6. Domains for 2rhc:
  1. Domain d2rhca_: 2rhc A: [152048]
    automated match to d1w4zb_
    complexed with emo, nap
  2. Domain d2rhcb_: 2rhc B: [152049]
    automated match to d1w4zb_
    complexed with emo, nap
7. Domains for 2rhr:
  1. Domain d2rhra_: 2rhr A: [168127]
    automated match to d1w4zb_
    complexed with emo, ndp; mutant
  2. Domain d2rhrb_: 2rhr B: [168128]
    automated match to d1w4zb_
    complexed with emo, ndp; mutant
8. Domains for 3csd:
  1. Domain d3csda_: 3csd A: [173431]
    automated match to d1w4zb_
    complexed with emo, ndp; mutant
  2. Domain d3csdb_: 3csd B: [199206]
    automated match to d3ri3b_
    complexed with emo, ndp; mutant
Thermotoga maritima [TaxId:2336] [102150] (1 PDB entry)
TM1169
- Domains for 1o5i:
  1. Domain d1o5ia_: 1o5i A: [92499]
    structural genomics
    complexed with nad
  2. Domain d1o5ib_: 1o5i B: [92500]
    structural genomics
    complexed with nad
  3. Domain d1o5ic_: 1o5i C: [92501]
    structural genomics
    complexed with nad
  4. Domain d1o5id_: 1o5i D: [92502]
    structural genomics
    complexed with nad
Thermus thermophilus [TaxId:274] [117407] (1 PDB entry)
Uniprot Q5SK98
- Domains for 1uls:
  1. Domain d1ulsa_: 1uls A: [113284]
    Structural genomics target
  2. Domain d1ulsb_: 1uls B: [113285]
    Structural genomics target
  3. Domain d1ulsc_: 1uls C: [113286]
    Structural genomics target
  4. Domain d1ulsd_: 1uls D: [113287]
    Structural genomics target
  5. Domain d1ulse_: 1uls E: [113288]
    Structural genomics target
  6. Domain d1ulsf_: 1uls F: [113289]
    Structural genomics target
  7. Domain d1ulsg_: 1uls G: [113290]
    Structural genomics target
  8. Domain d1ulsh_: 1uls H: [113291]
    Structural genomics target
Thermus thermophilus, TTHB020 [TaxId:274] [141876] (1 PDB entry)
Uniprot Q53WH2 2-242
- Domains for 2a4k:
  1. Domain d2a4ka1: 2a4k A:2-242 [126156]
    complexed with unx
  2. Domain d2a4kb_: 2a4k B: [126157]
    automated match to d2a4ka1
    complexed with unx

More info for Protein beta-keto acyl carrier protein reductase from c.2.1.2: Tyrosine-dependent oxidoreductases

Timeline for Protein beta-keto acyl carrier protein reductase from c.2.1.2: Tyrosine-dependent oxidoreductases:

Protein beta-keto acyl carrier protein reductase from c.2.1.2: Tyrosine-dependent oxidoreductases first appeared (with stable ids) in SCOP 1.55
Protein beta-keto acyl carrier protein reductase from c.2.1.2: Tyrosine-dependent oxidoreductases appears in SCOPe 2.04
Protein beta-keto acyl carrier protein reductase from c.2.1.2: Tyrosine-dependent oxidoreductases appears in SCOPe 2.06
Protein beta-keto acyl carrier protein reductase from c.2.1.2: Tyrosine-dependent oxidoreductases appears in the current release, SCOPe 2.08