SCOPe 2.08: Protein: Bacterial secondary alcohol dehydrogenase

Lineage for Protein: Bacterial secondary alcohol dehydrogenase

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)
Family c.2.1.1: Alcohol dehydrogenase-like, C-terminal domain [51736] (19 proteins)
N-terminal all-beta domain defines family
Protein Bacterial secondary alcohol dehydrogenase [51742] (2 species)

Species:

Clostridium beijerinckii [TaxId:1520] [51743] (4 PDB entries)
1. Domains for 1jqb:
  1. Domain d1jqba2: 1jqb A:1140-1313 [77152]
    Other proteins in same PDB: d1jqba1, d1jqbb1, d1jqbc1, d1jqbd1
    complexed with zn; mutant
  2. Domain d1jqbb2: 1jqb B:2140-2313 [77154]
    Other proteins in same PDB: d1jqba1, d1jqbb1, d1jqbc1, d1jqbd1
    complexed with zn; mutant
  3. Domain d1jqbc2: 1jqb C:3140-3313 [77156]
    Other proteins in same PDB: d1jqba1, d1jqbb1, d1jqbc1, d1jqbd1
    complexed with zn; mutant
  4. Domain d1jqbd2: 1jqb D:4140-4313 [77158]
    Other proteins in same PDB: d1jqba1, d1jqbb1, d1jqbc1, d1jqbd1
    complexed with zn; mutant
2. Domains for 1kev:
  1. Domain d1keva2: 1kev A:140-313 [29765]
    Other proteins in same PDB: d1keva1, d1kevb1, d1kevc1, d1kevd1
    complexed with ndp, zn
  2. Domain d1kevb2: 1kev B:140-313 [29766]
    Other proteins in same PDB: d1keva1, d1kevb1, d1kevc1, d1kevd1
    complexed with ndp, zn
  3. Domain d1kevc2: 1kev C:140-313 [29767]
    Other proteins in same PDB: d1keva1, d1kevb1, d1kevc1, d1kevd1
    complexed with ndp, zn
  4. Domain d1kevd2: 1kev D:140-313 [29768]
    Other proteins in same PDB: d1keva1, d1kevb1, d1kevc1, d1kevd1
    complexed with ndp, zn
3. Domains for 1ped:
  1. Domain d1peda2: 1ped A:140-313 [29769]
    Other proteins in same PDB: d1peda1, d1pedb1, d1pedc1, d1pedd1
    complexed with zn
  2. Domain d1pedb2: 1ped B:140-313 [29770]
    Other proteins in same PDB: d1peda1, d1pedb1, d1pedc1, d1pedd1
    complexed with zn
  3. Domain d1pedc2: 1ped C:140-313 [29771]
    Other proteins in same PDB: d1peda1, d1pedb1, d1pedc1, d1pedd1
    complexed with zn
  4. Domain d1pedd2: 1ped D:140-313 [29772]
    Other proteins in same PDB: d1peda1, d1pedb1, d1pedc1, d1pedd1
    complexed with zn
4. Domains for 2b83:
  1. Domain d2b83a2: 2b83 A:140-313 [128060]
    Other proteins in same PDB: d2b83a1, d2b83b1, d2b83c1, d2b83d1
    automatically matched to d1bxza2
    complexed with zn
  2. Domain d2b83b2: 2b83 B:140-313 [128062]
    Other proteins in same PDB: d2b83a1, d2b83b1, d2b83c1, d2b83d1
    automatically matched to d1bxza2
    complexed with zn
  3. Domain d2b83c2: 2b83 C:140-313 [128064]
    Other proteins in same PDB: d2b83a1, d2b83b1, d2b83c1, d2b83d1
    automatically matched to d1bxza2
    complexed with zn
  4. Domain d2b83d2: 2b83 D:140-313 [128066]
    Other proteins in same PDB: d2b83a1, d2b83b1, d2b83c1, d2b83d1
    automatically matched to d1bxza2
    complexed with zn
Thermoanaerobacter brockii [TaxId:29323] [51744] (3 PDB entries)
1. Domains for 1bxz:
  1. Domain d1bxza2: 1bxz A:140-313 [29777]
    Other proteins in same PDB: d1bxza1, d1bxzb1, d1bxzc1, d1bxzd1
    complexed with cl, mg, sbt, zn
  2. Domain d1bxzb2: 1bxz B:140-313 [29778]
    Other proteins in same PDB: d1bxza1, d1bxzb1, d1bxzc1, d1bxzd1
    complexed with cl, mg, sbt, zn
  3. Domain d1bxzc2: 1bxz C:140-313 [29779]
    Other proteins in same PDB: d1bxza1, d1bxzb1, d1bxzc1, d1bxzd1
    complexed with cl, mg, sbt, zn
  4. Domain d1bxzd2: 1bxz D:140-313 [29780]
    Other proteins in same PDB: d1bxza1, d1bxzb1, d1bxzc1, d1bxzd1
    complexed with cl, mg, sbt, zn
2. Domains for 1ykf:
  1. Domain d1ykfa2: 1ykf A:140-313 [29773]
    Other proteins in same PDB: d1ykfa1, d1ykfb1, d1ykfc1, d1ykfd1
    complexed with nap, zn
  2. Domain d1ykfb2: 1ykf B:140-313 [29774]
    Other proteins in same PDB: d1ykfa1, d1ykfb1, d1ykfc1, d1ykfd1
    complexed with nap, zn
  3. Domain d1ykfc2: 1ykf C:140-313 [29775]
    Other proteins in same PDB: d1ykfa1, d1ykfb1, d1ykfc1, d1ykfd1
    complexed with nap, zn
  4. Domain d1ykfd2: 1ykf D:140-313 [29776]
    Other proteins in same PDB: d1ykfa1, d1ykfb1, d1ykfc1, d1ykfd1
    complexed with nap, zn
3. Domains for 2nvb:
  1. Domain d2nvba2: 2nvb A:140-313 [148461]
    Other proteins in same PDB: d2nvba1, d2nvbb1, d2nvbc1, d2nvbd1
    automatically matched to d1bxza2
    complexed with nap, zn
  2. Domain d2nvbb2: 2nvb B:140-313 [148463]
    Other proteins in same PDB: d2nvba1, d2nvbb1, d2nvbc1, d2nvbd1
    automatically matched to d1bxza2
    complexed with nap, zn
  3. Domain d2nvbc2: 2nvb C:140-313 [148465]
    Other proteins in same PDB: d2nvba1, d2nvbb1, d2nvbc1, d2nvbd1
    automatically matched to d1bxza2
    complexed with nap, zn
  4. Domain d2nvbd2: 2nvb D:140-313 [148467]
    Other proteins in same PDB: d2nvba1, d2nvbb1, d2nvbc1, d2nvbd1
    automatically matched to d1bxza2
    complexed with nap, zn

More info for Protein Bacterial secondary alcohol dehydrogenase from c.2.1.1: Alcohol dehydrogenase-like, C-terminal domain

Timeline for Protein Bacterial secondary alcohol dehydrogenase from c.2.1.1: Alcohol dehydrogenase-like, C-terminal domain:

Protein Bacterial secondary alcohol dehydrogenase from c.2.1.1: Alcohol dehydrogenase-like, C-terminal domain first appeared (with stable ids) in SCOP 1.55, called Protein Bacterial secondary alcohol dehydrogenase from c.2.1.1: Alcohol/glucose dehydrogenases, C-terminal domain
Protein Bacterial secondary alcohol dehydrogenase from c.2.1.1: Alcohol dehydrogenase-like, C-terminal domain appears in SCOPe 2.07