Lineage for Species: Zymomonas mobilis [TaxId: 542]

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2434695Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2448538Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family) (S)
  5. 2448539Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)
  6. 2448550Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
    contains zinc-binding subdomain
  7. 2448579Species Zymomonas mobilis [TaxId:542] [51716] (156 PDB entries)
    Uniprot P28720

PDB entries in Species: Zymomonas mobilis [TaxId: 542]:

  1. Domain(s) for 1efz:
  2. Domain(s) for 1enu:
  3. Domain(s) for 1f3e:
  4. Domain(s) for 1k4g:
  5. Domain(s) for 1k4h:
  6. Domain(s) for 1n2v:
  7. Domain(s) for 1ozm:
  8. Domain(s) for 1ozq:
  9. Domain(s) for 1p0b:
  10. Domain(s) for 1p0d:
  11. Domain(s) for 1p0e:
  12. Domain(s) for 1pud:
  13. Domain(s) for 1pxg:
    • 2448715Domain d1pxga_: 1pxg A: [95287]
      protein/RNA complex; complexed with gol, prf, zn
  14. Domain(s) for 1q2r:
    1. 2448735Domain d1q2ra_: 1q2r A: [95634]
      protein/RNA complex; complexed with 9dg, zn
    2. 2448736Domain d1q2rb_: 1q2r B: [95635]
      protein/RNA complex; complexed with 9dg, zn
    3. 2448737Domain d1q2rc_: 1q2r C: [95636]
      protein/RNA complex; complexed with 9dg, zn
    4. 2448738Domain d1q2rd_: 1q2r D: [95637]
      protein/RNA complex; complexed with 9dg, zn
  15. Domain(s) for 1q2s:
    1. 2448739Domain d1q2sa_: 1q2s A: [95638]
      protein/RNA complex; complexed with 9dg, zn
    2. 2448740Domain d1q2sb_: 1q2s B: [95639]
      protein/RNA complex; complexed with 9dg, zn
    3. 2448741Domain d1q2sc_: 1q2s C: [95640]
      protein/RNA complex; complexed with 9dg, zn
    4. 2448742Domain d1q2sd_: 1q2s D: [95641]
      protein/RNA complex; complexed with 9dg, zn
  16. Domain(s) for 1q4w:
  17. Domain(s) for 1q63:
  18. Domain(s) for 1q65:
  19. Domain(s) for 1q66:
  20. Domain(s) for 1r5y:
  21. Domain(s) for 1s38:
  22. Domain(s) for 1s39:
  23. Domain(s) for 1wkd:
  24. Domain(s) for 1wke:
  25. Domain(s) for 1wkf:
  26. Domain(s) for 1y5v:
  27. Domain(s) for 1y5w:
  28. Domain(s) for 1y5x:
    1. 2448718Domain d1y5xa_: 1y5x A: [122655]
      automated match to d1q2ra_
      protein/RNA complex; complexed with e89, zn
    2. 2448719Domain d1y5xd_: 1y5x D: [122656]
      automated match to d1q2ra_
      protein/RNA complex; complexed with e89, zn
  29. Domain(s) for 2bbf:
  30. Domain(s) for 2nqz:
  31. Domain(s) for 2nso:
  32. Domain(s) for 2oko:
  33. Domain(s) for 2pot:
    • 2448692Domain d2pota_: 2pot A: [167235]
      automated match to d1q2ra_
      protein/RNA complex; complexed with gol, gun, zn; mutant
  34. Domain(s) for 2pwu:
  35. Domain(s) for 2pwv:
    • 2448653Domain d2pwva_: 2pwv A: [167317]
      automated match to d1q2ra_
      protein/RNA complex; complexed with gol, pq0, zn; mutant
  36. Domain(s) for 2qii:
  37. Domain(s) for 2qzr:
  38. Domain(s) for 2z1v:
  39. Domain(s) for 2z1w:
    • 2448616Domain d2z1wa_: 2z1w A: [170987]
      automated match to d1q2ra_
      protein/RNA complex; complexed with bdi, gol, zn; mutant
  40. Domain(s) for 2z1x:
    • 2448619Domain d2z1xa_: 2z1x A: [170988]
      automated match to d1q2ra_
      protein/RNA complex; complexed with gol, prf, zn; mutant
  41. Domain(s) for 2z7k:
  42. Domain(s) for 3bl3:
  43. Domain(s) for 3bld:
    • 2448580Domain d3blda_: 3bld A: [172698]
      automated match to d1q2ra_
      protein/RNA complex; complexed with gol, prf, zn; mutant
  44. Domain(s) for 3bll:
    • 2448582Domain d3blla_: 3bll A: [172699]
      automated match to d1q2ra_
      protein/RNA complex; complexed with bpq, gol, zn; mutant
  45. Domain(s) for 3blo:
    • 2448622Domain d3bloa_: 3blo A: [172700]
      automated match to d1q2ra_
      protein/RNA complex; complexed with gol, qei, zn; mutant
  46. Domain(s) for 3c2n:
  47. Domain(s) for 3c2y:
  48. Domain(s) for 3c2z:
  49. Domain(s) for 3eos:
  50. Domain(s) for 3eou:
  51. Domain(s) for 3gc4:
  52. Domain(s) for 3gc5:
  53. Domain(s) for 3ge7:
  54. Domain(s) for 3gev:
  55. Domain(s) for 3gfn:
  56. Domain(s) for 3hfy:
  57. Domain(s) for 3rr4:
  58. Domain(s) for 3s1g:
  59. Domain(s) for 3sm0:
  60. Domain(s) for 3tll:
  61. Domain(s) for 3unt:
  62. Domain(s) for 3uvi:
  63. Domain(s) for 3v0y:
  64. Domain(s) for 4dxx:
  65. Domain(s) for 4dy1:
  66. Domain(s) for 4e2v:
    • 2448596Domain d4e2va_: 4e2v A: [196700]
      automated match to d1q2ra_
      protein/RNA complex; complexed with gol, prf, zn; mutant
  67. Domain(s) for 4gd0:
  68. Domain(s) for 4h7z:
    • 2448623Domain d4h7za_: 4h7z A: [222425]
      automated match to d4e2va_
      protein/RNA complex; complexed with gol, gun, zn; mutant
  69. Domain(s) for 4kwo:
  70. Domain(s) for 4l56:
  71. Domain(s) for 4lbu:
  72. Domain(s) for 4leq:
  73. Domain(s) for 4puj:
  74. Domain(s) for 4puk:
  75. Domain(s) for 4pul:
    • 2448706Domain d4pula_: 4pul A: [258243]
      automated match to d1q2ra_
      protein/RNA complex; complexed with 2wu, gol, zn; mutant
  76. Domain(s) for 4pum:
    • 2448729Domain d4puma_: 4pum A: [258242]
      automated match to d1q2ra_
      protein/RNA complex; complexed with 2wu, gol, zn; mutant
  77. Domain(s) for 4pun:
  78. Domain(s) for 4q4m:
  79. Domain(s) for 4q4o:
    • 2448595Domain d4q4oa_: 4q4o A: [258304]
      automated match to d1p0ba_
      protein/RNA complex; complexed with 2ym, cl, dms, gol, zn
  80. Domain(s) for 4q4p:
    • 2448629Domain d4q4pa_: 4q4p A: [258295]
      automated match to d1p0ba_
      protein/RNA complex; complexed with 2yo, cl, dms, gol, zn
  81. Domain(s) for 4q4q:
  82. Domain(s) for 4q4r:
  83. Domain(s) for 4q4s:
  84. Domain(s) for 4q8m:
  85. Domain(s) for 4q8n:
  86. Domain(s) for 4q8o:
    • 2448728Domain d4q8oa_: 4q8o A: [272935]
      automated match to d1q2ra_
      protein/RNA complex; complexed with ckr, gol, zn; mutant
  87. Domain(s) for 4q8p:
    • 2448660Domain d4q8pa_: 4q8p A: [272934]
      automated match to d1q2ra_
      protein/RNA complex; complexed with ckr, gol, zn; mutant
  88. Domain(s) for 4q8q:
  89. Domain(s) for 4q8t:
  90. Domain(s) for 4q8u:
  91. Domain(s) for 4q8v:
  92. Domain(s) for 4q8w:
  93. Domain(s) for 5egr:
    • 2448691Domain d5egra_: 5egr A: [324892]
      automated match to d1p0ba_
      protein/RNA complex; complexed with 5nt, edo, gol, zn
  94. Domain(s) for 5i03:
    • 2448717Domain d5i03a_: 5i03 A: [329756]
      automated match to d1q2ra_
      protein/RNA complex; complexed with edo, gol, nez, zn
  95. Domain(s) for 5i06:
    • 2448632Domain d5i06a_: 5i06 A: [329742]
      automated match to d1q2ra_
      protein/RNA complex; complexed with e89, edo, gol, pge, zn
  96. Domain(s) for 5i07:
    1. 2448726Domain d5i07a_: 5i07 A: [329732]
      automated match to d1q2ra_
      protein/RNA complex; complexed with edo, gol, ne8, zn
    2. 2448727Domain d5i07b_: 5i07 B: [329805]
      automated match to d1q2ra_
      protein/RNA complex; complexed with edo, gol, ne8, zn
  97. Domain(s) for 5i09:
  98. Domain(s) for 5j9m:
    • 2448626Domain d5j9ma_: 5j9m A: [334425]
      automated match to d1p0ba_
      protein/RNA complex; complexed with 6hd, cl, edo, gol, zn
  99. Domain(s) for 5j9n:
  100. Domain(s) for 5j9o:
  101. Domain(s) for 5jgm:
    • 2448639Domain d5jgma_: 5jgm A: [334086]
      automated match to d1p0ba_
      protein/RNA complex; complexed with 810, cl, edo, gol, zn
  102. Domain(s) for 5jgo:
    • 2448636Domain d5jgoa_: 5jgo A: [334194]
      automated match to d1p0ba_
      protein/RNA complex; complexed with 6jx, edo, gol, zn
  103. Domain(s) for 5jsv:
  104. Domain(s) for 5jsw:
    • 2448605Domain d5jswa_: 5jsw A: [334426]
      automated match to d1p0ba_
      protein/RNA complex; complexed with 6mm, cl, edo, gol, zn
  105. Domain(s) for 5jt5:
    • 2448602Domain d5jt5a_: 5jt5 A: [334427]
      automated match to d1p0ba_
      protein/RNA complex; complexed with 6nk, cl, edo, gol, zn
  106. Domain(s) for 5jt6:
  107. Domain(s) for 5jt7:
  108. Domain(s) for 5jxq:
  109. Domain(s) for 5lpo:
    • 2448657Domain d5lpoa_: 5lpo A: [338532]
      automated match to d1q2ra_
      protein/RNA complex; complexed with 725, edo, gol, pg4, zn
  110. Domain(s) for 5lpp:
  111. Domain(s) for 5lpq:
    1. 2448745Domain d5lpqa_: 5lpq A: [338535]
      automated match to d1q2ra_
      protein/RNA complex; complexed with 72c, zn
    2. 2448746Domain d5lpqb_: 5lpq B: [338534]
      automated match to d1q2ra_
      protein/RNA complex; complexed with 72c, zn
  112. Domain(s) for 5lps:
  113. Domain(s) for 5lpt:
    1. 2448743Domain d5lpta_: 5lpt A: [338613]
      automated match to d1q2ra_
      protein/RNA complex; complexed with 726, gol, zn
    2. 2448744Domain d5lptb_: 5lpt B: [338563]
      automated match to d1q2ra_
      protein/RNA complex; complexed with 726, gol, zn
  114. Domain(s) for 5n6f:
    • 2448587Domain d5n6fa_: 5n6f A: [346880]
      automated match to d5lpta_
      protein/RNA complex; complexed with dms, gun, peg, pge, zn
  115. Domain(s) for 5uti:
    • 2448633Domain d5utia_: 5uti A: [347890]
      automated match to d5lpta_
      protein/RNA complex; complexed with dms, ggb, pg4, pge, zn
  116. Domain(s) for 5utj:
    • 2448690Domain d5utja_: 5utj A: [347704]
      automated match to d5lpta_
      protein/RNA complex; complexed with aza, dms, peg, zn
  117. Domain(s) for 5v3c:
    • 2448656Domain d5v3ca_: 5v3c A: [352255]
      automated match to d5lpta_
      protein/RNA complex; complexed with amh, dms, peg, pge, zn
  118. Domain(s) for 6fmn:
  119. Domain(s) for 6fpu:
  120. Domain(s) for 6fso:
    • 2448661Domain d6fsoa_: 6fso A: [366448]
      automated match to d5lpta_
      protein/RNA complex; complexed with act, dms, f63, peg, pg4, pge, zn
  121. Domain(s) for 6h7c:
  122. Domain(s) for 6rkq:
    • 2448708Domain d6rkqa_: 6rkq A: [386899]
      automated match to d5lpta_
      protein/RNA complex; complexed with dms, gol, k75, zn
  123. Domain(s) for 6rkt:
    • 2448720Domain d6rkta_: 6rkt A: [386995]
      automated match to d5lpta_
      protein/RNA complex; complexed with dms, gol, k7h, zn
  124. Domain(s) for 6yfw:
  125. Domain(s) for 6yfx:
  126. Domain(s) for 6ygk:
  127. Domain(s) for 6ygl:
  128. Domain(s) for 6ygm:
  129. Domain(s) for 6ygo:
  130. Domain(s) for 6ygp:
  131. Domain(s) for 6ygr:
  132. Domain(s) for 6ygs:
  133. Domain(s) for 6ygv:
  134. Domain(s) for 6ygw:
  135. Domain(s) for 6ygx:
  136. Domain(s) for 6ygy:
  137. Domain(s) for 6ygz:
  138. Domain(s) for 6yh1:
  139. Domain(s) for 6yh2:
  140. Domain(s) for 6yh3:
  141. Domain(s) for 6yhd:
  142. Domain(s) for 6yhe:
  143. Domain(s) for 6yiq:
    1. 2448693Domain d6yiqa_: 6yiq A: [383852]
      automated match to d5lpta_
      protein/RNA complex; complexed with gol, oqn, zn
    2. 2448694Domain d6yiqb_: 6yiq B: [383863]
      automated match to d5lpta_
      protein/RNA complex; complexed with gol, oqn, zn
  144. Domain(s) for 6yry:
  145. Domain(s) for 6yyz:
  146. Domain(s) for 6z0d:
  147. Domain(s) for 7a0b:
    • 2448686Domain d7a0ba_: 7a0b A: [404397]
      automated match to d5lpta_
      protein/RNA complex; complexed with edo, gol, qtq, zn; mutant
  148. Domain(s) for 7a3v:
    • 2448673Domain d7a3va_: 7a3v A: [404447]
      automated match to d5lpta_
      protein/RNA complex; complexed with edo, gol, qxe, zn; mutant
  149. Domain(s) for 7a3x:
    • 2448697Domain d7a3xa_: 7a3x A: [404445]
      automated match to d5lpta_
      protein/RNA complex; complexed with gol, qxb, zn; mutant
  150. Domain(s) for 7a4k:
    • 2448667Domain d7a4ka_: 7a4k A: [404823]
      automated match to d5lpta_
      protein/RNA complex; complexed with gol, qzt, zn; mutant
  151. Domain(s) for 7a4x:
    • 2448721Domain d7a4xa_: 7a4x A: [404396]
      automated match to d5lpta_
      protein/RNA complex; complexed with dms, edo, gol, zn; mutant
  152. Domain(s) for 7a6d:
    • 2448649Domain d7a6da_: 7a6d A: [404403]
      automated match to d5lpta_
      protein/RNA complex; complexed with edo, gol, r1e, rgn, zn; mutant
  153. Domain(s) for 7a9e:
    • 2448683Domain d7a9ea_: 7a9e A: [404420]
      automated match to d5lpta_
      protein/RNA complex; complexed with edo, gol, r4w, zn; mutant
  154. Domain(s) for 7adn:
  155. Domain(s) for 7apl:
  156. Domain(s) for 7apm:

More info for Species Zymomonas mobilis [TaxId:542] from c.1.20.1 Queosine tRNA-guanine transglycosylase

Timeline for Species Zymomonas mobilis [TaxId:542] from c.1.20.1 Queosine tRNA-guanine transglycosylase: