Lineage for Species: Streptomyces rubiginosus [TaxId: 1929]

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2424564Superfamily c.1.15: Xylose isomerase-like [51658] (8 families) (S)
    different families share similar but non-identical metal-binding sites
  5. 2424615Family c.1.15.3: Xylose isomerase [51665] (2 protein domains)
  6. 2424616Protein D-xylose isomerase [51666] (13 species)
  7. 2424744Species Streptomyces rubiginosus [TaxId:1929] [51670] (52 PDB entries)

PDB entries in Species: Streptomyces rubiginosus [TaxId: 1929]:

  1. Domain(s) for 1gw9:
  2. Domain(s) for 1mnz:
    • 2424745Domain d1mnza_: 1mnz A: [79328]
      atomic resolution structure
      complexed with ca, mg, mrd, trs
  3. Domain(s) for 1n1w:
  4. Domain(s) for 1o1h:
    1. 2424751Domain d1o1ha_: 1o1h A: [81044]
      complexed with ca, cl, kr, mg, mpd, trs
    2. 2424752Domain d1o1hb_: 1o1h B: [81045]
      complexed with ca, cl, kr, mg, mpd, trs
  5. Domain(s) for 1oad:
    1. 2424757Domain d1oada_: 1oad A: [81253]
      complexed with mg, mn, mpd, mqd, mrd, trs
    2. 2424758Domain d1oadb_: 1oad B: [81254]
      complexed with mg, mn, mpd, mqd, mrd, trs
  6. Domain(s) for 1xib:
  7. Domain(s) for 1xic:
  8. Domain(s) for 1xid:
  9. Domain(s) for 1xie:
  10. Domain(s) for 1xif:
  11. Domain(s) for 1xig:
  12. Domain(s) for 1xih:
  13. Domain(s) for 1xii:
  14. Domain(s) for 1xij:
  15. Domain(s) for 1xis:
  16. Domain(s) for 2xis:
  17. Domain(s) for 3kbj:
  18. Domain(s) for 3kbm:
  19. Domain(s) for 3kbn:
  20. Domain(s) for 3kbs:
  21. Domain(s) for 3kbv:
  22. Domain(s) for 3kbw:
  23. Domain(s) for 3kcj:
  24. Domain(s) for 3kcl:
  25. Domain(s) for 3kco:
  26. Domain(s) for 3xis:
  27. Domain(s) for 4a8n:
  28. Domain(s) for 4e3v:
  29. Domain(s) for 4j4k:
  30. Domain(s) for 4lnc:
  31. Domain(s) for 4qdp:
  32. Domain(s) for 4qdw:
  33. Domain(s) for 4qe1:
  34. Domain(s) for 4qe4:
  35. Domain(s) for 4qe5:
  36. Domain(s) for 4qee:
  37. Domain(s) for 4qeh:
  38. Domain(s) for 4us6:
    1. 2424755Domain d4us6a_: 4us6 A: [272728]
      automated match to d1mnza_
      complexed with ca, gol, mg, na
    2. 2424756Domain d4us6b_: 4us6 B: [272727]
      automated match to d1mnza_
      complexed with ca, gol, mg, na
  39. Domain(s) for 4w4q:
  40. Domain(s) for 4xis:
  41. Domain(s) for 4zb0:
    1. 2424798Domain d4zb0a_: 4zb0 A: [312335]
      automated match to d4xisa_
      complexed with fru, glc, mn
    2. 2424799Domain d4zb0b_: 4zb0 B: [312351]
      automated match to d4xisa_
      complexed with fru, glc, mn
  42. Domain(s) for 4zb2:
  43. Domain(s) for 4zb5:
  44. Domain(s) for 4zbc:
    1. 2424796Domain d4zbca1: 4zbc A:2-387 [312317]
      Other proteins in same PDB: d4zbca2, d4zbcb2
      automated match to d1mnza_
      complexed with fru, glc, mn
    2. 2424797Domain d4zbcb1: 4zbc B:2-387 [312314]
      Other proteins in same PDB: d4zbca2, d4zbcb2
      automated match to d1mnza_
      complexed with fru, glc, mn
  45. Domain(s) for 5avh:
  46. Domain(s) for 5avn:
    1. 2424748Domain d5avna_: 5avn A: [274681]
      automated match to d4xisa_
      complexed with ca, mn, so4
    2. 2424749Domain d5avnb_: 5avn B: [274679]
      automated match to d4xisa_
      complexed with ca, mn, so4
  47. Domain(s) for 5i7g:
  48. Domain(s) for 5vr0:
  49. Domain(s) for 5y4i:
  50. Domain(s) for 5y4j:
  51. Domain(s) for 8xia:
  52. Domain(s) for 9xia:

More info for Species Streptomyces rubiginosus [TaxId:1929] from c.1.15.3 D-xylose isomerase

Timeline for Species Streptomyces rubiginosus [TaxId:1929] from c.1.15.3 D-xylose isomerase: