Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.15: Xylose isomerase-like [51658] (8 families) different families share similar but non-identical metal-binding sites |
Family c.1.15.3: Xylose isomerase [51665] (2 proteins) |
Protein D-xylose isomerase [51666] (13 species) |
Actinoplanes missouriensis [TaxId:1866] [51673] (14 PDB entries) |
Domain d1bhwa_: 1bhw A: [29525] |
Domain d1bhwb_: 1bhw B: [29526] |
Domain d1bhwc_: 1bhw C: [29527] |
Domain d1bhwd_: 1bhw D: [29528] |
Domain d1xima_: 1xim A: [29473] complexed with co, xyl |
Domain d1ximb_: 1xim B: [29474] complexed with co, xyl |
Domain d1ximc_: 1xim C: [29475] complexed with co, xyl |
Domain d1ximd_: 1xim D: [29476] complexed with co, xyl |
Domain d1xina_: 1xin A: [29513] complexed with mg, xyl |
Domain d1xinb_: 1xin B: [29514] complexed with mg, xyl |
Domain d1xinc_: 1xin C: [29515] complexed with mg, xyl |
Domain d1xind_: 1xin D: [29516] complexed with mg, xyl |
Domain d2xima_: 2xim A: [29497] complexed with mg, xyl |
Domain d2ximb_: 2xim B: [29498] complexed with mg, xyl |
Domain d2ximc_: 2xim C: [29499] complexed with mg, xyl |
Domain d2ximd_: 2xim D: [29500] complexed with mg, xyl |
Domain d2xina_: 2xin A: [29493] complexed with co, sor |
Domain d2xinb_: 2xin B: [29494] complexed with co, sor |
Domain d2xinc_: 2xin C: [29495] complexed with co, sor |
Domain d2xind_: 2xin D: [29496] complexed with co, sor |
Domain d3xima_: 3xim A: [29477] complexed with co, sor |
Domain d3ximb_: 3xim B: [29478] complexed with co, sor |
Domain d3ximc_: 3xim C: [29479] complexed with co, sor |
Domain d3ximd_: 3xim D: [29480] complexed with co, sor |
Domain d3xina_: 3xin A: [29489] |
Domain d3xinb_: 3xin B: [29490] |
Domain d3xinc_: 3xin C: [29491] |
Domain d3xind_: 3xin D: [29492] |
Domain d4xima_: 4xim A: [29485] complexed with co |
Domain d4ximb_: 4xim B: [29486] complexed with co |
Domain d4ximc_: 4xim C: [29487] complexed with co |
Domain d4ximd_: 4xim D: [29488] complexed with co |
Domain d5xima_: 5xim A: [29521] complexed with mg, sor |
Domain d5ximb_: 5xim B: [29522] complexed with mg, sor |
Domain d5ximc_: 5xim C: [29523] complexed with mg, sor |
Domain d5ximd_: 5xim D: [29524] complexed with mg, sor |
Domain d5xina_: 5xin A: [29481] complexed with mg, xls |
Domain d5xinb_: 5xin B: [29482] complexed with mg, xls |
Domain d5xinc_: 5xin C: [29483] complexed with mg, xls |
Domain d5xind_: 5xin D: [29484] complexed with mg, xls |
Domain d6xima_: 6xim A: [29517] complexed with mg, xls |
Domain d6ximb_: 6xim B: [29518] complexed with mg, xls |
Domain d6ximc_: 6xim C: [29519] complexed with mg, xls |
Domain d6ximd_: 6xim D: [29520] complexed with mg, xls |
Domain d7xima_: 7xim A: [29501] |
Domain d7ximb_: 7xim B: [29502] |
Domain d7ximc_: 7xim C: [29503] |
Domain d7ximd_: 7xim D: [29504] |
Domain d8xima_: 8xim A: [29509] complexed with mg, xls |
Domain d8ximb_: 8xim B: [29510] complexed with mg, xls |
Domain d8ximc_: 8xim C: [29511] complexed with mg, xls |
Domain d8ximd_: 8xim D: [29512] complexed with mg, xls |
Domain d9xima_: 9xim A: [29505] complexed with mn, xls |
Domain d9ximb_: 9xim B: [29506] complexed with mn, xls |
Domain d9ximc_: 9xim C: [29507] complexed with mn, xls |
Domain d9ximd_: 9xim D: [29508] complexed with mn, xls |
Arthrobacter, strain b3728 [TaxId:1663] [51672] (17 PDB entries) |
Domain d1dida_: 1did A: [29459] complexed with dig, mn |
Domain d1didb_: 1did B: [29460] complexed with dig, mn |
Domain d1diea_: 1die A: [29443] complexed with mg, noj |
Domain d1dieb_: 1die B: [29444] complexed with mg, noj |
Domain d1xlaa_: 1xla A: [29445] |
Domain d1xlab_: 1xla B: [29446] |
Domain d1xlba_: 1xlb A: [29465] complexed with mg |
Domain d1xlbb_: 1xlb B: [29466] complexed with mg |
Domain d1xlca_: 1xlc A: [29447] complexed with mg, xyl |
Domain d1xlcb_: 1xlc B: [29448] complexed with mg, xyl |
Domain d1xlda_: 1xld A: [29449] complexed with mn, xyl |
Domain d1xldb_: 1xld B: [29450] complexed with mn, xyl |
Domain d1xlea_: 1xle A: [29471] complexed with mn |
Domain d1xleb_: 1xle B: [29472] complexed with mn |
Domain d1xlfa_: 1xlf A: [29451] complexed with gco, mn |
Domain d1xlfb_: 1xlf B: [29452] complexed with gco, mn |
Domain d1xlga_: 1xlg A: [29461] complexed with al, mg, xyl |
Domain d1xlgb_: 1xlg B: [29462] complexed with al, mg, xyl |
Domain d1xlha_: 1xlh A: [29453] complexed with al |
Domain d1xlhb_: 1xlh B: [29454] complexed with al |
Domain d1xlia_: 1xli A: [29455] complexed with glt, mn |
Domain d1xlib_: 1xli B: [29456] complexed with glt, mn |
Domain d1xlja_: 1xlj A: [29463] complexed with mn, xyl |
Domain d1xljb_: 1xlj B: [29464] complexed with mn, xyl |
Domain d1xlka_: 1xlk A: [29469] complexed with mn |
Domain d1xlkb_: 1xlk B: [29470] complexed with mn |
Domain d1xlla_: 1xll A: [29467] complexed with zn |
Domain d1xllb_: 1xll B: [29468] complexed with zn |
Domain d1xlma_: 1xlm A: [29441] complexed with al, xyl; mutant |
Domain d1xlmb_: 1xlm B: [29442] complexed with al, xyl; mutant |
Domain d4xiaa_: 4xia A: [29439] complexed with mg, sor |
Domain d4xiab_: 4xia B: [29440] complexed with mg, sor |
Domain d5xiaa_: 5xia A: [29457] complexed with mg, xyl |
Domain d5xiab_: 5xia B: [29458] complexed with mg, xyl |
Bacillus stearothermophilus [TaxId:1422] [51675] (1 PDB entry) |
Domain d1a0da_: 1a0d A: [29533] complexed with mn |
Domain d1a0db_: 1a0d B: [29534] complexed with mn |
Domain d1a0dc_: 1a0d C: [29535] complexed with mn |
Domain d1a0dd_: 1a0d D: [29536] complexed with mn |
Clostridium thermosulfurogenes, also known as Thermoanaerobacter thermosulfurigenes [TaxId:33950] [51674] (1 PDB entry) |
Domain d1a0ca_: 1a0c A: [29529] complexed with co |
Domain d1a0cb_: 1a0c B: [29530] complexed with co |
Domain d1a0cc_: 1a0c C: [29531] complexed with co |
Domain d1a0cd_: 1a0c D: [29532] complexed with co |
Streptomyces albus [TaxId:1888] [51667] (1 PDB entry) |
Domain d6xiaa_: 6xia A: [29406] |
Streptomyces diastaticus, M1033 [TaxId:1956] [51671] (2 PDB entries) |
Domain d1clka_: 1clk A: [29438] complexed with co, mg |
Domain d1qt1a_: 1qt1 A: [29436] complexed with co |
Domain d1qt1b_: 1qt1 B: [29437] complexed with co |
Streptomyces murinus [TaxId:33900] [51668] (1 PDB entry) |
Domain d1dxia_: 1dxi A: [29407] complexed with mg |
Domain d1dxib_: 1dxi B: [29408] complexed with mg |
Streptomyces olivochromogenes [TaxId:1963] [51669] (9 PDB entries) |
Domain d1muwa_: 1muw A: [79495] atomic resolution structure complexed with mg, mn, oh |
Domain d1s5ma_: 1s5m A: [98565] complexed with glc, mn, na |
Domain d1s5na_: 1s5n A: [98566] complexed with mn, na, oh, xyl |
Domain d1xyaa_: 1xya A: [29411] complexed with mg, oh |
Domain d1xyab_: 1xya B: [29412] complexed with mg, oh |
Domain d1xyba_: 1xyb A: [29417] complexed with glo, mg |
Domain d1xybb_: 1xyb B: [29418] complexed with glo, mg |
Domain d1xyca_: 1xyc A: [29419] complexed with 3mf, mg |
Domain d1xycb_: 1xyc B: [29420] complexed with 3mf, mg |
Domain d1xyla_: 1xyl A: [29413] complexed with mg, oh |
Domain d1xylb_: 1xyl B: [29414] complexed with mg, oh |
Domain d1xyma_: 1xym A: [29415] complexed with glo, mg, oh |
Domain d1xymb_: 1xym B: [29416] complexed with glo, mg, oh |
Domain d2gyia_: 2gyi A: [29409] complexed with hya, mg |
Domain d2gyib_: 2gyi B: [29410] complexed with hya, mg |
Streptomyces rubiginosus [TaxId:1929] [51670] (89 PDB entries) |
Domain d1gw9a_: 1gw9 A: [70658] complexed with ca, iod, lxc |
Domain d1mnza_: 1mnz A: [79328] atomic resolution structure complexed with ca, mg, mrd, trs |
Domain d1n1wb_: 1n1w B: [302756] automated match to d1o1ha_ complexed with bro, ca, cl, kr, mg, mpd, trs |
Domain d1o1ha_: 1o1h A: [81044] complexed with ca, cl, kr, mg, mpd, trs |
Domain d1o1hb_: 1o1h B: [81045] complexed with ca, cl, kr, mg, mpd, trs |
Domain d1oada_: 1oad A: [81253] complexed with mg, mn, mpd, mqd, mrd, trs |
Domain d1oadb_: 1oad B: [81254] complexed with mg, mn, mpd, mqd, mrd, trs |
Domain d1xiba_: 1xib A: [29424] complexed with mn |
Domain d1xica_: 1xic A: [29425] complexed with mn, xls |
Domain d1xida_: 1xid A: [29431] complexed with asc, mn |
Domain d1xiea_: 1xie A: [29433] complexed with aso, mn |
Domain d1xifa_: 1xif A: [29426] complexed with glc, mn |
Domain d1xiga_: 1xig A: [29432] complexed with mn, xyl |
Domain d1xiha_: 1xih A: [29430] complexed with mn, sor |
Domain d1xiia_: 1xii A: [29428] complexed with mn, xul |
Domain d1xija_: 1xij A: [29429] complexed with mn, the |
Domain d1xisa_: 1xis A: [29422] complexed with mn |
Domain d2xisa_: 2xis A: [29427] complexed with mg, xyl |
Domain d3kbja_: 3kbj A: [179237] automated match to d1dxia_ |
Domain d3kbma_: 3kbm A: [179238] automated match to d1dxia_ complexed with cd, glc |
Domain d3kbna_: 3kbn A: [179239] automated match to d1dxia_ complexed with glo, ni |
Domain d3kbsa_: 3kbs A: [179240] automated match to d1dxia_ complexed with cd |
Domain d3kbva_: 3kbv A: [179241] automated match to d1dxia_ complexed with ni |
Domain d3kbwa_: 3kbw A: [179242] automated match to d1dxia_ complexed with mg, ni |
Domain d3kcja_: 3kcj A: [179271] automated match to d1dxia_ complexed with dod |
Domain d3kcla_: 3kcl A: [179272] automated match to d1dxia_ complexed with cd, dod, glc |
Domain d3kcoa_: 3kco A: [179273] automated match to d1dxia_ complexed with dod, glo, ni |
Domain d3xisa_: 3xis A: [29423] complexed with mg, xys |
Domain d4a8na_: 4a8n A: [218715] automated match to d1mnza_ complexed with co, gol |
Domain d4e3va_: 4e3v A: [220245] automated match to d1mnza_ complexed with mg, mn, pro, so4 |
Domain d4j4ka_: 4j4k A: [256788] automated match to d1oada_ complexed with act, mpd, zn |
Domain d4lnca_: 4lnc A: [236777] automated match to d3kbna_ complexed with dod, glc, mg, mn; mutant |
Domain d4qdpa_: 4qdp A: [259487] automated match to d1mnza_ complexed with arb, cd, dod |
Domain d4qdwa_: 4qdw A: [259485] automated match to d1mnza_ complexed with dod, lai, ni |
Domain d4qe1a_: 4qe1 A: [259488] automated match to d1mnza_ complexed with cd, ruu |
Domain d4qe4a_: 4qe4 A: [259491] automated match to d1mnza_ complexed with 34v, ni |
Domain d4qe5a_: 4qe5 A: [259489] automated match to d1mnza_ complexed with mg, ruu |
Domain d4qeea_: 4qee A: [259486] automated match to d1mnza_ complexed with ni, z6j |
Domain d4qeha_: 4qeh A: [259490] automated match to d1mnza_ complexed with 32o, mg |
Domain d4us6a_: 4us6 A: [272728] automated match to d1mnza_ complexed with ca, gol, mg, na |
Domain d4us6b_: 4us6 B: [272727] automated match to d1mnza_ complexed with ca, gol, mg, na |
Domain d4w4qa_: 4w4q A: [260843] automated match to d1mnza_ complexed with ca |
Domain d4xisa_: 4xis A: [29421] complexed with mn |
Domain d4zb0a_: 4zb0 A: [312335] automated match to d4xisa_ complexed with fru, glc, mn |
Domain d4zb0b_: 4zb0 B: [312351] automated match to d4xisa_ complexed with fru, glc, mn |
Domain d4zb2a_: 4zb2 A: [312307] automated match to d1mnza_ complexed with fru, glc, mn |
Domain d4zb5a1: 4zb5 A:2-387 [312295] Other proteins in same PDB: d4zb5a2 automated match to d1mnza_ complexed with glc, mn |
Domain d4zbca1: 4zbc A:2-387 [312317] Other proteins in same PDB: d4zbca2, d4zbcb2 automated match to d1mnza_ complexed with fru, glc, mn |
Domain d4zbcb1: 4zbc B:2-387 [312314] Other proteins in same PDB: d4zbca2, d4zbcb2 automated match to d1mnza_ complexed with fru, glc, mn |
Domain d5avha_: 5avh A: [274682] automated match to d1dxia_ |
Domain d5avna_: 5avn A: [274681] automated match to d4xisa_ complexed with ca, mn, so4 |
Domain d5avnb_: 5avn B: [274679] automated match to d4xisa_ complexed with ca, mn, so4 |
Domain d5i7ga_: 5i7g A: [314991] automated match to d1mnza_ |
Domain d5vr0a_: 5vr0 A: [351689] automated match to d1mnza_ complexed with ca, cl, mn, mrd |
Domain d5y4ia_: 5y4i A: [341160] automated match to d1mnza_ complexed with act, gol, mg |
Domain d5y4ja_: 5y4j A: [339394] automated match to d4lnca_ complexed with mg, xyl |
Domain d5zyca_: 5zyc A: [360743] automated match to d1mnza_ complexed with act, edo, mn |
Domain d5zyda_: 5zyd A: [360747] automated match to d1mnza_ complexed with act, mg |
Domain d5zyea_: 5zye A: [360744] automated match to d1mnza_ complexed with glc, mn |
Domain d6irka_: 6irk A: [369143] automated match to d1mnza_ complexed with mg |
Domain d6kcaa_: 6kca A: [385750] automated match to d1mnza_ complexed with mg |
Domain d6kcca_: 6kcc A: [385771] automated match to d1mnza_ complexed with mg |
Domain d6kd2a_: 6kd2 A: [370553] automated match to d1mnza_ complexed with mg |
Domain d6ll2a_: 6ll2 A: [387135] automated match to d1mnza_ complexed with mg |
Domain d6oqza_: 6oqz A: [378039] automated match to d1mnza_ complexed with mg, mn, mpd |
Domain d6qnca_: 6qnc A: [375169] automated match to d1mnza_ complexed with co, glc, mg |
Domain d6qnda_: 6qnd A: [375174] automated match to d1mnza_ complexed with co, glo, mg |
Domain d6qnha_: 6qnh A: [375192] automated match to d1mnza_ complexed with co, mg |
Domain d6qnia_: 6qni A: [375196] automated match to d1mnza_ complexed with co, glc, mg |
Domain d6qnja_: 6qnj A: [375170] automated match to d1mnza_ complexed with co, glc, mg |
Domain d6qrra_: 6qrr A: [371511] automated match to d1dxia_ complexed with edo, ipa, mg, mn, na |
Domain d6qrsa_: 6qrs A: [371385] automated match to d1dxia_ complexed with edo, ipa, mg, mn, na |
Domain d6qrta_: 6qrt A: [371452] automated match to d1dxia_ complexed with edo, ipa, mg, mn, na |
Domain d6qrua_: 6qru A: [371471] automated match to d1dxia_ complexed with edo, ipa, mg, mn, na |
Domain d6qrva_: 6qrv A: [371414] automated match to d1dxia_ complexed with edo, ipa, mg, mn, na |
Domain d6qrwa_: 6qrw A: [371366] automated match to d1dxia_ complexed with edo, ipa, mg, mn, na |
Domain d6qrxa_: 6qrx A: [371406] automated match to d1dxia_ complexed with edo, ipa, mg, mn, na |
Domain d6qrya_: 6qry A: [371425] automated match to d1dxia_ complexed with edo, ipa, mg, mn, na |
Domain d6qufa_: 6quf A: [366277] automated match to d1mnza_ complexed with gol, mn, so4 |
Domain d6quka_: 6quk A: [366267] automated match to d1mnza_ complexed with gol, mn, so4 |
Domain d6qukb_: 6quk B: [366272] automated match to d1mnza_ complexed with gol, mn, so4 |
Domain d6rnda_: 6rnd A: [375202] automated match to d1mnza_ complexed with glc, mg |
Domain d6rnfa_: 6rnf A: [375212] automated match to d1mnza_ complexed with glc, mg |
Domain d6vrsa_: 6vrs A: [381255] automated match to d1mnza_ complexed with mn |
Domain d6vrsb_: 6vrs B: [381210] automated match to d1mnza_ complexed with mn |
Domain d6vrsc_: 6vrs C: [381232] automated match to d1mnza_ complexed with mn |
Domain d6vrsd_: 6vrs D: [381214] automated match to d1mnza_ complexed with mn |
Domain d6yboa_: 6ybo A: [393629] automated match to d1mnza_ complexed with mg, na |
Domain d6ybra_: 6ybr A: [393627] automated match to d1mnza_ complexed with mg, na |
Domain d7bjza_: 7bjz A: [404461] automated match to d1dxia_ complexed with mn |
Domain d7bjzb_: 7bjz B: [404460] automated match to d1dxia_ complexed with mn |
Domain d7bvla_: 7bvl A: [394379] automated match to d1mnza_ complexed with mg |
Domain d7bvna_: 7bvn A: [394372] automated match to d1mnza_ complexed with mg |
Domain d7ck0a_: 7ck0 A: [394477] automated match to d1mnza_ complexed with mg |
Domain d7cvka_: 7cvk A: [390060] automated match to d1mnza_ complexed with mg |
Domain d7cvma_: 7cvm A: [390070] automated match to d1mnza_ complexed with mg |
Domain d7e03a_: 7e03 A: [398959] automated match to d1mnza_ complexed with mg |
Domain d7njga_: 7njg A: [405749] automated match to d1mnza_ complexed with co |
Domain d8xiaa_: 8xia A: [29435] complexed with mn, xls |
Domain d9xiaa_: 9xia A: [29434] complexed with dfr, mn |
Streptomyces sp. [TaxId:253732] [196714] (2 PDB entries) |
Domain d4hhla_: 4hhl A: [196715] automated match to d1dxia_ complexed with co, edo, mg |
Domain d4hhlb_: 4hhl B: [202434] automated match to d4hhla_ complexed with co, edo, mg |
Domain d4hhma_: 4hhm A: [202435] automated match to d4hhmg_ complexed with co, mg; mutant |
Domain d4hhmb_: 4hhm B: [202436] automated match to d4hhmg_ complexed with co, mg; mutant |
Domain d4hhmc_: 4hhm C: [202437] automated match to d4hhmg_ complexed with co, mg; mutant |
Domain d4hhmd_: 4hhm D: [202438] automated match to d4hhmg_ complexed with co, mg; mutant |
Domain d4hhme_: 4hhm E: [202439] automated match to d4hhmg_ complexed with co, mg; mutant |
Domain d4hhmf_: 4hhm F: [202440] automated match to d4hhmg_ complexed with co, mg; mutant |
Domain d4hhmg_: 4hhm G: [196716] automated match to d1dxia_ complexed with co, mg; mutant |
Domain d4hhmh_: 4hhm H: [202441] automated match to d4hhmg_ complexed with co, mg; mutant |
Thermotoga neapolitana [TaxId:2337] [51676] (1 PDB entry) |
Domain d1a0ea_: 1a0e A: [29537] complexed with co |
Domain d1a0ed_: 1a0e D: [29538] complexed with co |
Thermus aquaticus, subsp. Caldophilus [TaxId:271] [51677] (1 PDB entry) |
Domain d1bxca_: 1bxc A: [29539] |
Domain d1bxcb_: 1bxc B: [29540] |
Domain d1bxcc_: 1bxc C: [29541] |
Domain d1bxcd_: 1bxc D: [29542] |
Thermus aquaticus, subsp. Thermophilus [TaxId:271] [51678] (1 PDB entry) |
Domain d1bxba_: 1bxb A: [29543] |
Domain d1bxbb_: 1bxb B: [29544] |
Domain d1bxbc_: 1bxb C: [29545] |
Domain d1bxbd_: 1bxb D: [29546] |
Timeline for Protein D-xylose isomerase from c.1.15.3: Xylose isomerase: