SCOP 1.67: Species: Escherichia coli

Lineage for Species: Escherichia coli

Root: SCOP 1.67
Class c: Alpha and beta proteins (a/b) [51349] (130 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (28 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.11: Enolase C-terminal domain-like [51604] (2 families)
binds metal ion (magnesium or manganese) in conserved site inside barrel
N-terminal alpha+beta domain is common to this family
Family c.1.11.2: D-glucarate dehydratase-like [51609] (8 proteins)
Protein D-glucarate dehydratase [51610] (2 species)
Species Escherichia coli [TaxId:562] [51612] (6 PDB entries)

PDB entries in Species: Escherichia coli:

Domain(s) for 1ec7:
1. Domain d1ec7a1: 1ec7 A:138-446 [29218]
  Other proteins in same PDB: d1ec7a2, d1ec7b2, d1ec7c2, d1ec7d2
2. Domain d1ec7b1: 1ec7 B:138-446 [29219]
  Other proteins in same PDB: d1ec7a2, d1ec7b2, d1ec7c2, d1ec7d2
3. Domain d1ec7c1: 1ec7 C:138-446 [29220]
  Other proteins in same PDB: d1ec7a2, d1ec7b2, d1ec7c2, d1ec7d2
4. Domain d1ec7d1: 1ec7 D:138-446 [29221]
  Other proteins in same PDB: d1ec7a2, d1ec7b2, d1ec7c2, d1ec7d2
  complexed with ipa, mg
Domain(s) for 1ec8:
1. Domain d1ec8a1: 1ec8 A:138-446 [29222]
  Other proteins in same PDB: d1ec8a2, d1ec8b2, d1ec8c2, d1ec8d2
2. Domain d1ec8b1: 1ec8 B:138-446 [29223]
  Other proteins in same PDB: d1ec8a2, d1ec8b2, d1ec8c2, d1ec8d2
3. Domain d1ec8c1: 1ec8 C:138-446 [29224]
  Other proteins in same PDB: d1ec8a2, d1ec8b2, d1ec8c2, d1ec8d2
4. Domain d1ec8d1: 1ec8 D:138-446 [29225]
  Other proteins in same PDB: d1ec8a2, d1ec8b2, d1ec8c2, d1ec8d2
  complexed with glr, ipa, mg
Domain(s) for 1ec9:
1. Domain d1ec9a1: 1ec9 A:138-446 [29226]
  Other proteins in same PDB: d1ec9a2, d1ec9b2, d1ec9c2, d1ec9d2
2. Domain d1ec9b1: 1ec9 B:138-446 [29227]
  Other proteins in same PDB: d1ec9a2, d1ec9b2, d1ec9c2, d1ec9d2
3. Domain d1ec9c1: 1ec9 C:138-446 [29228]
  Other proteins in same PDB: d1ec9a2, d1ec9b2, d1ec9c2, d1ec9d2
4. Domain d1ec9d1: 1ec9 D:138-446 [29229]
  Other proteins in same PDB: d1ec9a2, d1ec9b2, d1ec9c2, d1ec9d2
  complexed with ipa, mg, xyh
Domain(s) for 1ecq:
1. Domain d1ecqa1: 1ecq A:138-446 [29230]
  Other proteins in same PDB: d1ecqa2, d1ecqb2, d1ecqc2, d1ecqd2
2. Domain d1ecqb1: 1ecq B:138-446 [29231]
  Other proteins in same PDB: d1ecqa2, d1ecqb2, d1ecqc2, d1ecqd2
3. Domain d1ecqc1: 1ecq C:138-446 [29232]
  Other proteins in same PDB: d1ecqa2, d1ecqb2, d1ecqc2, d1ecqd2
4. Domain d1ecqd1: 1ecq D:138-446 [29233]
  Other proteins in same PDB: d1ecqa2, d1ecqb2, d1ecqc2, d1ecqd2
  complexed with dxg, ipa, mg
Domain(s) for 1jct:
1. Domain d1jcta1: 1jct A:138-446 [62882]
  Other proteins in same PDB: d1jcta2, d1jctb2
2. Domain d1jctb1: 1jct B:138-446 [62884]
  Other proteins in same PDB: d1jcta2, d1jctb2
  complexed with gkr, ipa, mg; mutant
Domain(s) for 1jdf:
1. Domain d1jdfa1: 1jdf A:138-446 [62897]
  Other proteins in same PDB: d1jdfa2, d1jdfb2, d1jdfc2, d1jdfd2
2. Domain d1jdfb1: 1jdf B:138-446 [62899]
  Other proteins in same PDB: d1jdfa2, d1jdfb2, d1jdfc2, d1jdfd2
3. Domain d1jdfc1: 1jdf C:138-446 [62901]
  Other proteins in same PDB: d1jdfa2, d1jdfb2, d1jdfc2, d1jdfd2
4. Domain d1jdfd1: 1jdf D:138-446 [62903]
  Other proteins in same PDB: d1jdfa2, d1jdfb2, d1jdfc2, d1jdfd2
  complexed with ipa, kgr, mg; mutant

More info for Species Escherichia coli [TaxId:562] from c.1.11.2 D-glucarate dehydratase

Timeline for Species Escherichia coli [TaxId:562] from c.1.11.2 D-glucarate dehydratase:

Species Escherichia coli [TaxId:562] from c.1.11.2 D-glucarate dehydratase first appeared (with stable ids) in SCOP 1.55
Species Escherichia coli [TaxId:562] from c.1.11.2 D-glucarate dehydratase appears in SCOP 1.65
Species Escherichia coli [TaxId:562] from c.1.11.2 D-glucarate dehydratase appears in SCOP 1.69
Species Escherichia coli [TaxId:562] from c.1.11.2 D-glucarate dehydratase appears in the current release, SCOPe 2.08