Lineage for Protein: D-glucarate dehydratase

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2086988Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families) (S)
    binds metal ion (magnesium or manganese) in conserved site inside barrel
    N-terminal alpha+beta domain is common to this superfamily
  5. 2087095Family c.1.11.2: D-glucarate dehydratase-like [51609] (15 protein domains)
  6. 2087112Protein D-glucarate dehydratase [51610] (2 species)

Species:

  1. 2087113Escherichia coli [TaxId:562] [51612] (7 PDB entries)
    1. Domains for 1ec7:
      1. 2087116Domain d1ec7a1: 1ec7 A:138-446 [29218]
        Other proteins in same PDB: d1ec7a2, d1ec7b2, d1ec7c2, d1ec7d2
        complexed with ipa, mg
      2. 2087117Domain d1ec7b1: 1ec7 B:138-446 [29219]
        Other proteins in same PDB: d1ec7a2, d1ec7b2, d1ec7c2, d1ec7d2
        complexed with ipa, mg
      3. 2087118Domain d1ec7c1: 1ec7 C:138-446 [29220]
        Other proteins in same PDB: d1ec7a2, d1ec7b2, d1ec7c2, d1ec7d2
        complexed with ipa, mg
      4. 2087119Domain d1ec7d1: 1ec7 D:138-446 [29221]
        Other proteins in same PDB: d1ec7a2, d1ec7b2, d1ec7c2, d1ec7d2
        complexed with ipa, mg
    2. Domains for 1ec8:
      1. 2087120Domain d1ec8a1: 1ec8 A:138-446 [29222]
        Other proteins in same PDB: d1ec8a2, d1ec8b2, d1ec8c2, d1ec8d2
        complexed with glr, ipa, mg
      2. 2087121Domain d1ec8b1: 1ec8 B:138-446 [29223]
        Other proteins in same PDB: d1ec8a2, d1ec8b2, d1ec8c2, d1ec8d2
        complexed with glr, ipa, mg
      3. 2087122Domain d1ec8c1: 1ec8 C:138-446 [29224]
        Other proteins in same PDB: d1ec8a2, d1ec8b2, d1ec8c2, d1ec8d2
        complexed with glr, ipa, mg
      4. 2087123Domain d1ec8d1: 1ec8 D:138-446 [29225]
        Other proteins in same PDB: d1ec8a2, d1ec8b2, d1ec8c2, d1ec8d2
        complexed with glr, ipa, mg
    3. Domains for 1ec9:
      1. 2087128Domain d1ec9a1: 1ec9 A:138-446 [29226]
        Other proteins in same PDB: d1ec9a2, d1ec9b2, d1ec9c2, d1ec9d2
        complexed with ipa, mg, xyh
      2. 2087129Domain d1ec9b1: 1ec9 B:138-446 [29227]
        Other proteins in same PDB: d1ec9a2, d1ec9b2, d1ec9c2, d1ec9d2
        complexed with ipa, mg, xyh
      3. 2087130Domain d1ec9c1: 1ec9 C:138-446 [29228]
        Other proteins in same PDB: d1ec9a2, d1ec9b2, d1ec9c2, d1ec9d2
        complexed with ipa, mg, xyh
      4. 2087131Domain d1ec9d1: 1ec9 D:138-446 [29229]
        Other proteins in same PDB: d1ec9a2, d1ec9b2, d1ec9c2, d1ec9d2
        complexed with ipa, mg, xyh
    4. Domains for 1ecq:
      1. 2087132Domain d1ecqa1: 1ecq A:138-446 [29230]
        Other proteins in same PDB: d1ecqa2, d1ecqb2, d1ecqc2, d1ecqd2
        complexed with dxg, ipa, mg
      2. 2087133Domain d1ecqb1: 1ecq B:138-446 [29231]
        Other proteins in same PDB: d1ecqa2, d1ecqb2, d1ecqc2, d1ecqd2
        complexed with dxg, ipa, mg
      3. 2087134Domain d1ecqc1: 1ecq C:138-446 [29232]
        Other proteins in same PDB: d1ecqa2, d1ecqb2, d1ecqc2, d1ecqd2
        complexed with dxg, ipa, mg
      4. 2087135Domain d1ecqd1: 1ecq D:138-446 [29233]
        Other proteins in same PDB: d1ecqa2, d1ecqb2, d1ecqc2, d1ecqd2
        complexed with dxg, ipa, mg
    5. Domains for 1jct:
      1. 2087136Domain d1jcta1: 1jct A:138-446 [62882]
        Other proteins in same PDB: d1jcta2, d1jctb2
        complexed with gkr, ipa, mg; mutant
      2. 2087137Domain d1jctb1: 1jct B:138-446 [62884]
        Other proteins in same PDB: d1jcta2, d1jctb2
        complexed with gkr, ipa, mg; mutant
    6. Domains for 1jdf:
      1. 2087124Domain d1jdfa1: 1jdf A:138-446 [62897]
        Other proteins in same PDB: d1jdfa2, d1jdfb2, d1jdfc2, d1jdfd2
        complexed with glr, ipa, mg; mutant
      2. 2087125Domain d1jdfb1: 1jdf B:138-446 [62899]
        Other proteins in same PDB: d1jdfa2, d1jdfb2, d1jdfc2, d1jdfd2
        complexed with glr, ipa, mg; mutant
      3. 2087126Domain d1jdfc1: 1jdf C:138-446 [62901]
        Other proteins in same PDB: d1jdfa2, d1jdfb2, d1jdfc2, d1jdfd2
        complexed with glr, ipa, mg; mutant
      4. 2087127Domain d1jdfd1: 1jdf D:138-446 [62903]
        Other proteins in same PDB: d1jdfa2, d1jdfb2, d1jdfc2, d1jdfd2
        complexed with glr, ipa, mg; mutant
    7. Domains for 4gyp:
      1. 2087114Domain d4gypa2: 4gyp A:138-446 [222275]
        Other proteins in same PDB: d4gypa1, d4gypb1, d4gypc1, d4gypc2, d4gypd1, d4gypd2
        automated match to d1ec9d1
        complexed with cit, gol, mg, p6g, peg, so4
      2. 2087115Domain d4gypb2: 4gyp B:138-446 [222277]
        Other proteins in same PDB: d4gypa1, d4gypb1, d4gypc1, d4gypc2, d4gypd1, d4gypd2
        automated match to d1ec7d1
        complexed with cit, gol, mg, p6g, peg, so4
  2. 2087138Pseudomonas putida [TaxId:303] [51611] (1 PDB entry)

More info for Protein D-glucarate dehydratase from c.1.11.2: D-glucarate dehydratase-like

Timeline for Protein D-glucarate dehydratase from c.1.11.2: D-glucarate dehydratase-like: