SCOPe 2.06: Family c.1.10.4: Class I DAHP synthetase

Lineage for Family c.1.10.4: Class I DAHP synthetase

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.4: Class I DAHP synthetase [51599] (3 proteins)

Proteins:

1. 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) [51600] (3 species)

   1. Species Baker's yeast (Saccharomyces cerevisiae), tyrosine-regulated isozyme [TaxId:4932] [82272] (11 PDB entries)

   2. Species Escherichia coli, phenylalanine-regulated isozyme [TaxId:562] [51601] (4 PDB entries)

   3. Species Thermotoga maritima [TaxId:2336] [110363] (1 PDB entry)
      Uniprot Q9WYH8

2. 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) [51602] (4 species)

   1. Species Aquifex aeolicus [TaxId:63363] [63922] (32 PDB entries)

   2. Species Escherichia coli [TaxId:562] [51603] (10 PDB entries)
      Uniprot P17579

   3. Species Haemophilus influenzae [TaxId:727] [102095] (1 PDB entry)

   4. Species Neisseria meningitidis [TaxId:487] [188482] (1 PDB entry)

3. automated matches [190083] (9 species)
   not a true protein

   1. Species Acinetobacter baumannii [TaxId:557600] [342983] (1 PDB entry)

   2. Species Aquifex aeolicus [TaxId:63363] [187662] (1 PDB entry)

   3. Species Burkholderia pseudomallei [TaxId:320372] [189833] (3 PDB entries)

   4. Species Escherichia coli [TaxId:83333] [320941] (1 PDB entry)

   5. Species Neisseria meningitidis [TaxId:122586] [189819] (16 PDB entries)

   6. Species Neisseria meningitidis [TaxId:491] [188836] (2 PDB entries)

   7. Species Pseudomonas aeruginosa [TaxId:20894] [228239] (1 PDB entry)

   8. Species Thermotoga maritima [TaxId:2336] [186804] (3 PDB entries)

   9. Species Vibrio cholerae [TaxId:686] [188599] (1 PDB entry)

More info for Family c.1.10.4: Class I DAHP synthetase

Timeline for Family c.1.10.4: Class I DAHP synthetase:

• Family c.1.10.4: Class I DAHP synthetase first appeared (with stable ids) in SCOP 1.55
  
• Family c.1.10.4: Class I DAHP synthetase appears in SCOPe 2.05
  
• Family c.1.10.4: Class I DAHP synthetase appears in SCOPe 2.07
  
• Family c.1.10.4: Class I DAHP synthetase appears in the current release, SCOPe 2.08