SCOPe 2.07: Protein: Fructose-bisphosphate aldolase (FBP aldolase)

Lineage for Protein: Fructose-bisphosphate aldolase (FBP aldolase)

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.10: Aldolase [51569] (9 families)
Common fold covers whole protein structure
Family c.1.10.2: Class II FBP aldolase [51591] (3 proteins)
metal-dependent
automatically mapped to Pfam PF01116
Protein Fructose-bisphosphate aldolase (FBP aldolase) [51592] (3 species)

Species:

Escherichia coli [TaxId:562] [51593] (4 PDB entries)
1. Domains for 1b57:
  1. Domain d1b57a_: 1b57 A: [29177]
    complexed with cl, na, pgh, zn
  2. Domain d1b57b_: 1b57 B: [29178]
    complexed with cl, na, pgh, zn
2. Domains for 1dos:
  1. Domain d1dosa_: 1dos A: [29175]
    complexed with nh4, zn
  2. Domain d1dosb_: 1dos B: [29176]
    complexed with nh4, zn
3. Domain for 1gyn:
  - Domain d1gyna_: 1gyn A: [83385]
    complexed with cd
4. Domain for 1zen:
  - Domain d1zena_: 1zen A: [29179]
    complexed with zn
Escherichia coli [TaxId:83333] [336437] (8 PDB entries)
1. Domains for 5gk3:
  1. Domain d5gk3a_: 5gk3 A: [336522]
    automated match to d1gyna_
    complexed with gol, peg, zn
  2. Domain d5gk3b_: 5gk3 B: [336440]
    automated match to d1gyna_
    complexed with gol, peg, zn
2. Domains for 5gk4:
  1. Domain d5gk4a_: 5gk4 A: [336443]
    automated match to d1gyna_
    complexed with gol, peg, zn
  2. Domain d5gk4b_: 5gk4 B: [336510]
    automated match to d1gyna_
    complexed with gol, peg, zn
3. Domains for 5gk5:
  1. Domain d5gk5a_: 5gk5 A: [336439]
    automated match to d1gyna_
    complexed with gol, peg, zn
  2. Domain d5gk5b_: 5gk5 B: [336450]
    automated match to d1gyna_
    complexed with gol, peg, zn
  3. Domain d5gk5c_: 5gk5 C: [336497]
    automated match to d1gyna_
    complexed with gol, peg, zn
  4. Domain d5gk5d_: 5gk5 D: [336512]
    automated match to d1gyna_
    complexed with gol, peg, zn
  5. Domain d5gk5e_: 5gk5 E: [336441]
    automated match to d1gyna_
    complexed with gol, peg, zn
  6. Domain d5gk5f_: 5gk5 F: [336483]
    automated match to d1gyna_
    complexed with gol, peg, zn
  7. Domain d5gk5g_: 5gk5 G: [336478]
    automated match to d1gyna_
    complexed with gol, peg, zn
  8. Domain d5gk5h_: 5gk5 H: [336521]
    automated match to d1gyna_
    complexed with gol, peg, zn
4. Domains for 5gk6:
  1. Domain d5gk6a_: 5gk6 A: [336453]
    automated match to d1gyna_
    complexed with cit, peg, zn
  2. Domain d5gk6b_: 5gk6 B: [336442]
    automated match to d1gyna_
    complexed with cit, peg, zn
5. Domains for 5gk7:
  1. Domain d5gk7a_: 5gk7 A: [336444]
    automated match to d1gyna_
    complexed with gol, peg, trs, zn
  2. Domain d5gk7b_: 5gk7 B: [336519]
    automated match to d1gyna_
    complexed with gol, peg, trs, zn
6. Domains for 5gk8:
  1. Domain d5gk8a_: 5gk8 A: [336457]
    automated match to d1gyna_
    complexed with act, gol, peg, zn
  2. Domain d5gk8b_: 5gk8 B: [336479]
    automated match to d1gyna_
    complexed with act, gol, peg, zn
7. Domains for 5vjd:
  1. Domain d5vjda_: 5vjd A: [350931]
    automated match to d1gyna_
    complexed with 13p, na, zn
  2. Domain d5vjdb_: 5vjd B: [350933]
    automated match to d1gyna_
    complexed with 13p, na, zn
8. Domains for 5vje:
  1. Domain d5vjea_: 5vje A: [351077]
    automated match to d1gyna_
    complexed with gos, na
  2. Domain d5vjeb_: 5vje B: [351089]
    automated match to d1gyna_
    complexed with gos, na
Thermus aquaticus [TaxId:271] [102094] (2 PDB entries)
1. Domains for 1rv8:
  1. Domain d1rv8a_: 1rv8 A: [97916]
    complexed with co, na, so4
  2. Domain d1rv8b_: 1rv8 B: [97917]
    complexed with co, na, so4
  3. Domain d1rv8c_: 1rv8 C: [97918]
    complexed with co, na, so4
  4. Domain d1rv8d_: 1rv8 D: [97919]
    complexed with co, na, so4
2. Domains for 1rvg:
  1. Domain d1rvga_: 1rvg A: [97920]
    complexed with co, na, so4, yt3
  2. Domain d1rvgb_: 1rvg B: [97921]
    complexed with co, na, so4, yt3
  3. Domain d1rvgc_: 1rvg C: [97922]
    complexed with co, na, so4, yt3
  4. Domain d1rvgd_: 1rvg D: [97923]
    complexed with co, na, so4, yt3

More info for Protein Fructose-bisphosphate aldolase (FBP aldolase) from c.1.10.2: Class II FBP aldolase

Timeline for Protein Fructose-bisphosphate aldolase (FBP aldolase) from c.1.10.2: Class II FBP aldolase:

Protein Fructose-bisphosphate aldolase (FBP aldolase) from c.1.10.2: Class II FBP aldolase first appeared (with stable ids) in SCOP 1.55, called Protein Fructose-bisphosphate aldolase from c.1.10.2: Class II aldolase
Protein Fructose-bisphosphate aldolase (FBP aldolase) from c.1.10.2: Class II FBP aldolase appears in SCOPe 2.06
Protein Fructose-bisphosphate aldolase (FBP aldolase) from c.1.10.2: Class II FBP aldolase appears in the current release, SCOPe 2.08