SCOPe 2.08: Protein: KDPG aldolase

Lineage for Protein: KDPG aldolase

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.10: Aldolase [51569] (9 families)
Common fold covers whole protein structure

Family c.1.10.1: Class I aldolase [51570] (13 proteins)
the catalytic lysine forms schiff-base intermediate with substrate
possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels

Protein KDPG aldolase [51584] (3 species)

Species:

Escherichia coli [TaxId:562] [51585] (7 PDB entries)
1. Domains for 1eua:
  1. Domain d1euaa_: 1eua A: [29155]
    Schiff base intermediate
    complexed with act, pyr, so4
  2. Domain d1euab_: 1eua B: [29156]
    Schiff base intermediate
    complexed with act, pyr, so4
  3. Domain d1euac_: 1eua C: [29157]
    Schiff base intermediate
    complexed with act, pyr, so4
2. Domains for 1eun:
  1. Domain d1euna_: 1eun A: [29158]
    complexed with so4
  2. Domain d1eunb_: 1eun B: [29159]
    complexed with so4
  3. Domain d1eunc_: 1eun C: [29160]
    complexed with so4
3. Domains for 1fq0:
  1. Domain d1fq0a_: 1fq0 A: [29161]
    complexed with cit
  2. Domain d1fq0b_: 1fq0 B: [29162]
    complexed with cit
  3. Domain d1fq0c_: 1fq0 C: [29163]
    complexed with cit
4. Domains for 1fwr:
  1. Domain d1fwra_: 1fwr A: [29164]
    complexed with cit; mutant
  2. Domain d1fwrb_: 1fwr B: [29165]
    complexed with cit; mutant
  3. Domain d1fwrc_: 1fwr C: [29166]
    complexed with cit; mutant
5. Domain for 1wau:
  - Domain d1waua_: 1wau A: [120821]
    automated match to d1euaa_
    complexed with so4; mutant
6. Domains for 1wbh:
  1. Domain d1wbha1: 1wbh A:1-213 [120845]
    complexed with po4; mutant
  2. Domain d1wbhb_: 1wbh B: [120846]
    automated match to d1euaa_
    complexed with po4; mutant
  3. Domain d1wbhc_: 1wbh C: [120847]
    automated match to d1euaa_
    complexed with po4; mutant
7. Domains for 2c0a:
  1. Domain d2c0aa_: 2c0a A: [129579]
    automated match to d1euaa_
    complexed with po4
  2. Domain d2c0ab_: 2c0a B: [129580]
    automated match to d1euaa_
    complexed with po4
  3. Domain d2c0ac_: 2c0a C: [129581]
    automated match to d1euaa_
    complexed with po4
Pseudomonas putida [TaxId:303] [102091] (1 PDB entry)
- Domain for 1mxs:
  - Domain d1mxsa_: 1mxs A: [91494]
    complexed with so4
Thermotoga maritima [TaxId:2336] [110357] (1 PDB entry)
Uniprot Q9WXS1
- Domains for 1vlw:
  1. Domain d1vlwa1: 1vlw A:1-203 [108868]
    Other proteins in same PDB: d1vlwa2, d1vlwb2, d1vlwc2
    Structural genomics target
  2. Domain d1vlwb1: 1vlw B:1-204 [108869]
    Other proteins in same PDB: d1vlwa2, d1vlwb2, d1vlwc2
    Structural genomics target
  3. Domain d1vlwc1: 1vlw C:1-203 [108870]
    Other proteins in same PDB: d1vlwa2, d1vlwb2, d1vlwc2
    Structural genomics target

More info for Protein KDPG aldolase from c.1.10.1: Class I aldolase

Timeline for Protein KDPG aldolase from c.1.10.1: Class I aldolase:

Protein KDPG aldolase from c.1.10.1: Class I aldolase first appeared (with stable ids) in SCOP 1.55
Protein KDPG aldolase from c.1.10.1: Class I aldolase appears in SCOPe 2.07