Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2085156Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2085157Family c.1.10.1: Class I aldolase [51570] (13 protein domains)
    the catalytic lysine forms schiff-base intermediate with substrate
    possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels
  6. 2085576Protein N-acetylneuraminate lyase [51571] (2 species)
  7. 2085577Species Escherichia coli [TaxId:562] [51572] (4 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1fdy:
    1. 2085586Domain d1fdya_: 1fdy A: [29071]
      complexed with 3py
    2. 2085587Domain d1fdyb_: 1fdy B: [29072]
      complexed with 3py
    3. 2085588Domain d1fdyc_: 1fdy C: [29073]
      complexed with 3py
    4. 2085589Domain d1fdyd_: 1fdy D: [29074]
      complexed with 3py
  2. Domain(s) for 1fdz:
    1. 2085590Domain d1fdza_: 1fdz A: [29075]
      complexed with pyr
    2. 2085591Domain d1fdzb_: 1fdz B: [29076]
      complexed with pyr
    3. 2085592Domain d1fdzc_: 1fdz C: [29077]
      complexed with pyr
    4. 2085593Domain d1fdzd_: 1fdz D: [29078]
      complexed with pyr
  3. Domain(s) for 1hl2:
    1. 2085578Domain d1hl2a_: 1hl2 A: [83581]
      complexed with 3py; mutant
    2. 2085579Domain d1hl2b_: 1hl2 B: [83582]
      complexed with 3py; mutant
    3. 2085580Domain d1hl2c_: 1hl2 C: [83583]
      complexed with 3py; mutant
    4. 2085581Domain d1hl2d_: 1hl2 D: [83584]
      complexed with 3py; mutant
  4. Domain(s) for 1nal:
    1. 2085582Domain d1nal1_: 1nal 1: [29067]
      complexed with so4
    2. 2085583Domain d1nal2_: 1nal 2: [29068]
      complexed with so4
    3. 2085584Domain d1nal3_: 1nal 3: [29069]
      complexed with so4
    4. 2085585Domain d1nal4_: 1nal 4: [29070]
      complexed with so4

More info for Species Escherichia coli [TaxId:562] from c.1.10.1 N-acetylneuraminate lyase

Timeline for Species Escherichia coli [TaxId:562] from c.1.10.1 N-acetylneuraminate lyase: