Lineage for Protein: N-acetylneuraminate lyase

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2420459Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2420460Family c.1.10.1: Class I aldolase [51570] (13 protein domains)
    the catalytic lysine forms schiff-base intermediate with substrate
    possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels
  6. 2420921Protein N-acetylneuraminate lyase [51571] (2 species)

Species:

  1. 2420922Escherichia coli [TaxId:562] [51572] (4 PDB entries)
    1. Domains for 1fdy:
      1. 2420931Domain d1fdya_: 1fdy A: [29071]
        complexed with 3py
      2. 2420932Domain d1fdyb_: 1fdy B: [29072]
        complexed with 3py
      3. 2420933Domain d1fdyc_: 1fdy C: [29073]
        complexed with 3py
      4. 2420934Domain d1fdyd_: 1fdy D: [29074]
        complexed with 3py
    2. Domains for 1fdz:
      1. 2420935Domain d1fdza_: 1fdz A: [29075]
        complexed with pyr
      2. 2420936Domain d1fdzb_: 1fdz B: [29076]
        complexed with pyr
      3. 2420937Domain d1fdzc_: 1fdz C: [29077]
        complexed with pyr
      4. 2420938Domain d1fdzd_: 1fdz D: [29078]
        complexed with pyr
    3. Domains for 1hl2:
      1. 2420923Domain d1hl2a_: 1hl2 A: [83581]
        complexed with 3py; mutant
      2. 2420924Domain d1hl2b_: 1hl2 B: [83582]
        complexed with 3py; mutant
      3. 2420925Domain d1hl2c_: 1hl2 C: [83583]
        complexed with 3py; mutant
      4. 2420926Domain d1hl2d_: 1hl2 D: [83584]
        complexed with 3py; mutant
    4. Domains for 1nal:
      1. 2420927Domain d1nal1_: 1nal 1: [29067]
        complexed with so4
      2. 2420928Domain d1nal2_: 1nal 2: [29068]
        complexed with so4
      3. 2420929Domain d1nal3_: 1nal 3: [29069]
        complexed with so4
      4. 2420930Domain d1nal4_: 1nal 4: [29070]
        complexed with so4
  2. 2420939Haemophilus influenzae [TaxId:727] [51573] (6 PDB entries)
    1. Domains for 1f5z:
      1. 2420946Domain d1f5za_: 1f5z A: [29085]
      2. 2420947Domain d1f5zb_: 1f5z B: [29086]
      3. 2420948Domain d1f5zc_: 1f5z C: [29087]
      4. 2420949Domain d1f5zd_: 1f5z D: [29088]
    2. Domains for 1f6k:
      1. 2420942Domain d1f6ka_: 1f6k A: [29081]
        complexed with gol, so4
      2. 2420943Domain d1f6kc_: 1f6k C: [29082]
        complexed with gol, so4
    3. Domains for 1f6p:
      1. 2420954Domain d1f6pa_: 1f6p A: [29093]
      2. 2420955Domain d1f6pb_: 1f6p B: [29094]
      3. 2420956Domain d1f6pc_: 1f6p C: [29095]
      4. 2420957Domain d1f6pd_: 1f6p D: [29096]
    4. Domains for 1f73:
      1. 2420950Domain d1f73a_: 1f73 A: [29089]
        complexed with gol, hmn
      2. 2420951Domain d1f73b_: 1f73 B: [29090]
        complexed with gol, hmn
      3. 2420952Domain d1f73c_: 1f73 C: [29091]
        complexed with gol, hmn
      4. 2420953Domain d1f73d_: 1f73 D: [29092]
        complexed with gol, hmn
    5. Domains for 1f74:
      1. 2420940Domain d1f74a_: 1f74 A: [29079]
        complexed with cl, gol, nay
      2. 2420941Domain d1f74c_: 1f74 C: [29080]
        complexed with cl, gol, nay
    6. Domains for 1f7b:
      1. 2420944Domain d1f7ba_: 1f7b A: [29083]
        complexed with cl, nau, nav
      2. 2420945Domain d1f7bc_: 1f7b C: [29084]
        complexed with cl, nau, nav

More info for Protein N-acetylneuraminate lyase from c.1.10.1: Class I aldolase

Timeline for Protein N-acetylneuraminate lyase from c.1.10.1: Class I aldolase: