Lineage for Species: Pseudomonas diminuta [TaxId: 293]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2084338Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 2084452Family c.1.9.3: Phosphotriesterase-like [51564] (3 protein domains)
    automatically mapped to Pfam PF02126
  6. 2084453Protein Phosphotriesterase (parathion hydrolase, PTE) [51565] (4 species)
  7. 2084486Species Pseudomonas diminuta [TaxId:293] [51566] (23 PDB entries)
    Uniprot P0A434 30-365

PDB entries in Species: Pseudomonas diminuta [TaxId: 293]:

  1. Domain(s) for 1dpm:
    1. 2084527Domain d1dpma_: 1dpm A: [29062]
      complexed with ebp, fmt, zn
    2. 2084528Domain d1dpmb_: 1dpm B: [29063]
      complexed with ebp, fmt, zn
  2. Domain(s) for 1eyw:
  3. Domain(s) for 1ez2:
    1. 2084523Domain d1ez2a_: 1ez2 A: [29060]
      complexed with dii, zn
    2. 2084524Domain d1ez2b_: 1ez2 B: [29061]
      complexed with dii, zn
  4. Domain(s) for 1hzy:
    1. 2084491Domain d1hzya_: 1hzy A: [61468]
      complexed with edo, fmt, na, pel, zn
    2. 2084492Domain d1hzyb_: 1hzy B: [61469]
      complexed with edo, fmt, na, pel, zn
  5. Domain(s) for 1i03:
  6. Domain(s) for 1i0b:
    1. 2084496Domain d1i0ba_: 1i0b A: [61483]
      complexed with edo, fmt, mn, na, pel
    2. 2084497Domain d1i0bb_: 1i0b B: [61484]
      complexed with edo, fmt, mn, na, pel
  7. Domain(s) for 1i0d:
    1. 2084489Domain d1i0da_: 1i0d A: [61487]
      complexed with cd, edo, fmt, na, pel, zn
    2. 2084490Domain d1i0db_: 1i0d B: [61488]
      complexed with cd, edo, fmt, na, pel, zn
  8. Domain(s) for 1jgm:
    1. 2084493Domain d1jgma_: 1jgm A: [62953]
      complexed with cd, edo, na, pel
    2. 2084494Domain d1jgmb_: 1jgm B: [62954]
      complexed with cd, edo, na, pel
  9. Domain(s) for 1psc:
    1. 2084521Domain d1psca_: 1psc A: [29058]
      complexed with cd, ebp, fmt
    2. 2084522Domain d1pscb_: 1psc B: [29059]
      complexed with cd, ebp, fmt
  10. Domain(s) for 1pta:
  11. Domain(s) for 1qw7:
    1. 2084513Domain d1qw7a_: 1qw7 A: [111660]
      complexed with co, ebp, na
    2. 2084514Domain d1qw7b_: 1qw7 B: [111661]
      complexed with co, ebp, na
  12. Domain(s) for 2o4m:
    1. 2084498Domain d2o4ma_: 2o4m A: [166538]
      automated match to d1i0bb_
      complexed with acy, cac, gol, zn; mutant
    2. 2084499Domain d2o4mb_: 2o4m B: [166539]
      automated match to d1i0bb_
      complexed with acy, cac, gol, zn; mutant
    3. 2084500Domain d2o4mc_: 2o4m C: [166540]
      automated match to d1i0bb_
      complexed with acy, cac, gol, zn; mutant
    4. 2084501Domain d2o4mp_: 2o4m P: [166541]
      automated match to d1i0bb_
      complexed with acy, cac, gol, zn; mutant
  13. Domain(s) for 2o4q:
    1. 2084509Domain d2o4qa_: 2o4q A: [166544]
      automated match to d1i0bb_
      complexed with cac, zn; mutant
    2. 2084510Domain d2o4qb_: 2o4q B: [166545]
      automated match to d1i0bb_
      complexed with cac, zn; mutant
    3. 2084511Domain d2o4qk_: 2o4q K: [166546]
      automated match to d1i0bb_
      complexed with cac, zn; mutant
    4. 2084512Domain d2o4qp_: 2o4q P: [166547]
      automated match to d1i0bb_
      complexed with cac, zn; mutant
  14. Domain(s) for 2ob3:
    1. 2084487Domain d2ob3a_: 2ob3 A: [166617]
      automated match to d1eywa_
      complexed with btb, zn; mutant
    2. 2084488Domain d2ob3b_: 2ob3 B: [166618]
      automated match to d1eywa_
      complexed with btb, zn; mutant
  15. Domain(s) for 2oql:
    1. 2084504Domain d2oqla_: 2oql A: [166826]
      automated match to d1hzya_
      complexed with btb, gol, zn; mutant
    2. 2084505Domain d2oqlb_: 2oql B: [166827]
      automated match to d1hzya_
      complexed with btb, gol, zn; mutant
  16. Domain(s) for 3cak:
    1. 2084506Domain d3caka_: 3cak A: [173098]
      automated match to d1hzya_
      complexed with btb, co, dpf, efs
    2. 2084507Domain d3cakb_: 3cak B: [173099]
      automated match to d1hzya_
      complexed with btb, co, dpf, efs
  17. Domain(s) for 3cs2:
    1. 2084515Domain d3cs2a_: 3cs2 A: [173423]
      automated match to d1i0bb_
      complexed with cac, co; mutant
    2. 2084516Domain d3cs2b_: 3cs2 B: [173424]
      automated match to d1i0bb_
      complexed with cac, co; mutant
    3. 2084517Domain d3cs2k_: 3cs2 K: [173425]
      automated match to d1i0bb_
      complexed with cac, co; mutant
    4. 2084518Domain d3cs2p_: 3cs2 P: [173426]
      automated match to d1i0bb_
      complexed with cac, co; mutant
  18. Domain(s) for 3e3h:
    1. 2084530Domain d3e3ha_: 3e3h A: [174594]
      automated match to d1qw7a_
      complexed with co, ebp; mutant
    2. 2084531Domain d3e3hb_: 3e3h B: [174595]
      automated match to d1qw7a_
      complexed with co, ebp; mutant
  19. Domain(s) for 3upm:
    1. 2084525Domain d3upma_: 3upm A: [194866]
      automated match to d2oqlb_
      complexed with co; mutant
    2. 2084526Domain d3upmb_: 3upm B: [194865]
      automated match to d2oqlb_
      complexed with co; mutant
  20. Domain(s) for 3ur5:
    1. 2084502Domain d3ur5a_: 3ur5 A: [194858]
      automated match to d3caka_
      complexed with co, dpf; mutant
    2. 2084503Domain d3ur5b_: 3ur5 B: [194857]
      automated match to d3caka_
      complexed with co, dpf; mutant
  21. Domain(s) for 4pbe:
    1. 2084519Domain d4pbea_: 4pbe A: [272291]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
    2. 2084520Domain d4pbeg_: 4pbe G: [272289]
      automated match to d1qw7a_
      complexed with cac, mpd, zn
  22. Domain(s) for 4zst:
    1. 2084532Domain d4zsta_: 4zst A: [276622]
      automated match to d1qw7a_
      complexed with co; mutant
    2. 2084533Domain d4zstb_: 4zst B: [276623]
      automated match to d1qw7a_
      complexed with co; mutant
  23. Domain(s) for 4zsu:
    1. 2084534Domain d4zsua_: 4zsu A: [276620]
      automated match to d1qw7a_
      complexed with co; mutant
    2. 2084535Domain d4zsub_: 4zsu B: [276621]
      automated match to d1qw7a_
      complexed with co; mutant

More info for Species Pseudomonas diminuta [TaxId:293] from c.1.9.3 Phosphotriesterase (parathion hydrolase, PTE)

Timeline for Species Pseudomonas diminuta [TaxId:293] from c.1.9.3 Phosphotriesterase (parathion hydrolase, PTE):