Lineage for Superfamily c.1.9: Metallo-dependent hydrolases

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1565956Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1571126Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel

Families:

  1. 1571127c.1.9.1: Adenosine/AMP deaminase [51557] (3 proteins)
  2. 1571190c.1.9.2: alpha-subunit of urease, catalytic domain [51560] (1 protein)
  3. 1571238c.1.9.3: Phosphotriesterase-like [51564] (3 proteins)
    automatically mapped to Pfam PF02126
  4. 1571325c.1.9.4: Dihydroorotase [63917] (2 proteins)
  5. 1571363c.1.9.5: Cytosine deaminase catalytic domain [69390] (1 protein)
    automatically mapped to Pfam PF13147
    automatically mapped to Pfam PF07969
  6. 1571374c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain [75073] (5 proteins)
    automatically mapped to Pfam PF13147
  7. 1571435c.1.9.7: Renal dipeptidase [75079] (1 protein)
    automatically mapped to Pfam PF01244
  8. 1571442c.1.9.8: Uronate isomerase-like [75082] (2 proteins)
    contains all-alpha subdomain inserted after the first strand
  9. 1571520c.1.9.9: SAH/MTA deaminase-like [82258] (3 proteins)
    automatically mapped to Pfam PF01979
  10. 1571538c.1.9.10: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain [82261] (1 protein)
    automatically mapped to Pfam PF01979
  11. 1571557c.1.9.11: D-aminoacylase, catalytic domain [82264] (1 protein)
  12. 1571568c.1.9.12: TatD Mg-dependent DNase-like [82267] (5 proteins)
    automatically mapped to Pfam PF01026
  13. 1571584c.1.9.13: Isoaspartyl dipeptidase, catalytic domain [89489] (1 protein)
  14. 1571597c.1.9.14: Adenine deaminase-like [141816] (1 protein)
    automatically mapped to Pfam PF01979
    automatically mapped to Pfam PF13147
  15. 1571601c.1.9.15: PP1699/LP2961-like [141819] (6 proteins)
    Pfam PF04909; Amidohydrolase; stand-alone domain
  16. 1571660c.1.9.16: DR0824-like [159397] (1 protein)
    automatically mapped to Pfam PF01979
  17. 1571664c.1.9.17: Imidazolonepropionase-like [159400] (3 proteins)
    automatically mapped to Pfam PF13147
  18. 1571683c.1.9.18: Zn-dependent arginine carboxypeptidase-like [159408] (3 proteins)
    automatically mapped to Pfam PF01979
  19. 1571716c.1.9.0: automated matches [191327] (1 protein)
    not a true family

More info for Superfamily c.1.9: Metallo-dependent hydrolases

Timeline for Superfamily c.1.9: Metallo-dependent hydrolases: