SCOP 1.73: Protein: Plant beta-glucosidase (myrosinase)

Lineage for Protein: Plant beta-glucosidase (myrosinase)

Root: SCOP 1.73
Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (14 families)
Family c.1.8.4: Family 1 of glycosyl hydrolase [51521] (5 proteins)
Protein Plant beta-glucosidase (myrosinase) [51522] (4 species)

Species:

Creeping white clover (Trifolium repens) [TaxId:3899] [51524] (1 PDB entry)
Cyanogenic beta-glucosidase
- Domain for 1cbg:
  - Domain d1cbga_: 1cbg A: [28933]
Maize (Zea mays), zmglu1 [TaxId:4577] [51525] (9 PDB entries)
1. Domains for 1e1e:
  1. Domain d1e1ea_: 1e1e A: [28944]
  2. Domain d1e1eb_: 1e1e B: [28945]
    Dhurrinase
2. Domains for 1e1f:
  1. Domain d1e1fa_: 1e1f A: [28942]
  2. Domain d1e1fb_: 1e1f B: [28943]
    complexed with psg
3. Domains for 1e4l:
  1. Domain d1e4la_: 1e4l A: [28938]
  2. Domain d1e4lb_: 1e4l B: [28939]
    complexed with gol; mutant
4. Domains for 1e4n:
  1. Domain d1e4na_: 1e4n A: [28936]
  2. Domain d1e4nb_: 1e4n B: [28937]
    complexed with hbo; mutant
5. Domains for 1e55:
  1. Domain d1e55a_: 1e55 A: [28934]
  2. Domain d1e55b_: 1e55 B: [28935]
    complexed with dhr, glc; mutant
6. Domains for 1e56:
  1. Domain d1e56a_: 1e56 A: [28940]
  2. Domain d1e56b_: 1e56 B: [28941]
    complexed with glc, hbo; mutant
7. Domains for 1h49:
  1. Domain d1h49a_: 1h49 A: [83477]
  2. Domain d1h49b_: 1h49 B: [83478]
    complexed with bgc, hbo; mutant
8. Domains for 1hxj:
  1. Domain d1hxja_: 1hxj A: [76729]
  2. Domain d1hxjb_: 1hxj B: [76730]
9. Domains for 1v08:
  1. Domain d1v08a_: 1v08 A: [108202]
  2. Domain d1v08b_: 1v08 B: [108203]
    complexed with ntz; mutant
Sorghum bicolor [TaxId:4558] [110351] (2 PDB entries)
1. Domains for 1v02:
  1. Domain d1v02a_: 1v02 A: [108194]
  2. Domain d1v02b_: 1v02 B: [108195]
  3. Domain d1v02c_: 1v02 C: [108196]
  4. Domain d1v02d_: 1v02 D: [108197]
  5. Domain d1v02e_: 1v02 E: [108198]
  6. Domain d1v02f_: 1v02 F: [108199]
2. Domain for 1v03:
  - Domain d1v03a_: 1v03 A: [108200]
    complexed with bgc, ccn, iph; mutant
White mustard (Sinapis alba) [TaxId:3728] [51523] (17 PDB entries)
1. Domain for 1dwa:
  - Domain d1dwam_: 1dwa M: [28928]
    complexed with fuc, gol, man, nag, so4, xys, zn
2. Domain for 1dwf:
  - Domain d1dwfm_: 1dwf M: [28927]
    complexed with fuc, gol, man, nag, so4, xys, zn
3. Domain for 1dwg:
  - Domain d1dwgm_: 1dwg M: [28929]
    complexed with fuc, gol, man, nag, so4, xys, zn
4. Domain for 1dwh:
  - Domain d1dwhm_: 1dwh M: [28930]
    complexed with fuc, gol, man, nag, so4, xys, zn
5. Domain for 1dwi:
  - Domain d1dwim_: 1dwi M: [28931]
    complexed with fuc, gol, man, nag, so4, xys, zn
6. Domain for 1dwj:
  - Domain d1dwjm_: 1dwj M: [28932]
    complexed with fuc, gol, man, nag, so4, xys, zn
7. Domain for 1e4m:
  - Domain d1e4mm_: 1e4m M: [59226]
    complexed with fuc, gol, man, nag, so4, xys, zn
8. Domain for 1e6q:
  - Domain d1e6qm_: 1e6q M: [28920]
    complexed with fuc, gol, man, nag, ntz, so4, xys, zn
9. Domain for 1e6s:
  - Domain d1e6sm_: 1e6s M: [28919]
    complexed with fuc, gol, gox, man, nag, so4, xys, zn
10. Domain for 1e6x:
  - Domain d1e6xm_: 1e6x M: [28924]
    complexed with fuc, gol, lgc, man, nag, so4, xys, zn
11. Domain for 1e70:
  - Domain d1e70m_: 1e70 M: [28926]
    complexed with fuc, g2f, gol, man, nag, so4, xys, zn
12. Domain for 1e71:
  - Domain d1e71m_: 1e71 M: [28921]
    complexed with asc, fuc, gol, man, nag, so4, xys, zn
13. Domain for 1e72:
  - Domain d1e72m_: 1e72 M: [28923]
    complexed with asc, fuc, gol, gox, man, nag, so4, xys, zn
14. Domain for 1e73:
  - Domain d1e73m_: 1e73 M: [28922]
    complexed with asc, fuc, g2f, gol, man, nag, so4, xys
15. Domain for 1myr:
  - Domain d1myra_: 1myr A: [28925]
    complexed with fuc, gol, man, nag, so4, xys, zn
16. Domain for 1w9b:
  - Domain d1w9bm1: 1w9b M:3-501 [120777]
    automatically matched to d1e4mm_
    complexed with bma, cgt, fuc, gol, man, nag, so4, xyp, zn
17. Domain for 1w9d:
  - Domain d1w9dm1: 1w9d M:3-501 [120778]
    automatically matched to d1e4mm_
    complexed with bma, fuc, gol, man, nag, seh, so4, xyp, zn

More info for Protein Plant beta-glucosidase (myrosinase) from c.1.8.4: Family 1 of glycosyl hydrolase

Timeline for Protein Plant beta-glucosidase (myrosinase) from c.1.8.4: Family 1 of glycosyl hydrolase:

Protein Plant beta-glucosidase (myrosinase) from c.1.8.4: Family 1 of glycosyl hydrolase first appeared (with stable ids) in SCOP 1.55
Protein Plant beta-glucosidase (myrosinase) from c.1.8.4: Family 1 of glycosyl hydrolase appears in SCOP 1.71
Protein Plant beta-glucosidase (myrosinase) from c.1.8.4: Family 1 of glycosyl hydrolase appears in SCOP 1.75
Protein Plant beta-glucosidase (myrosinase) from c.1.8.4: Family 1 of glycosyl hydrolase appears in the current release, SCOPe 2.08