SCOP 1.69: Protein: Xylanase A, catalytic core

Lineage for Protein: Xylanase A, catalytic core

Root: SCOP 1.69
Class c: Alpha and beta proteins (a/b) [51349] (136 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (31 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (11 families)
Family c.1.8.3: beta-glycanases [51487] (22 proteins)
consist of a number of sequence families
Protein Xylanase A, catalytic core [51514] (8 species)

Species:

Cellulomonas fimi [TaxId:1708] [51520] (9 PDB entries)
synonym: beta-1,4-glycanase Cex
1. Domain for 1exp:
  - Domain d1exp__: 1exp - [28911]
2. Domain for 1fh7:
  - Domain d1fh7a_: 1fh7 A: [28914]
3. Domain for 1fh8:
  - Domain d1fh8a_: 1fh8 A: [28916]
4. Domain for 1fh9:
  - Domain d1fh9a_: 1fh9 A: [28913]
5. Domain for 1fhd:
  - Domain d1fhda_: 1fhd A: [28915]
6. Domain for 1j01:
  - Domain d1j01a_: 1j01 A: [77020]
7. Domain for 2exo:
  - Domain d2exo__: 2exo - [28912]
8. Domain for 2his:
  - Domain d2his__: 2his - [28918]
9. Domain for 2xyl:
  - Domain d2xyl__: 2xyl - [28917]
Emericella nidulans (Aspergillus nidulans) [TaxId:162425] [110350] (1 PDB entry)
- Domain for 1ta3:
  - Domain d1ta3b_: 1ta3 B: [106732]
    Other proteins in same PDB: d1ta3a_
Penicillium simplicissimum [TaxId:69488] [51516] (7 PDB entries)
1. Domain for 1b30:
  - Domain d1b30a_: 1b30 A: [28895]
2. Domain for 1b31:
  - Domain d1b31a_: 1b31 A: [28892]
3. Domain for 1b3v:
  - Domain d1b3va_: 1b3v A: [28897]
4. Domain for 1b3w:
  - Domain d1b3wa_: 1b3w A: [28898]
5. Domain for 1b3x:
  - Domain d1b3xa_: 1b3x A: [28893]
6. Domain for 1b3y:
  - Domain d1b3ya_: 1b3y A: [28896]
7. Domain for 1b3z:
  - Domain d1b3za_: 1b3z A: [28894]
Pseudomonas fluorescens [TaxId:294] [51517] (3 PDB entries)
1. Domains for 1clx:
  1. Domain d1clxa_: 1clx A: [28899]
  2. Domain d1clxb_: 1clx B: [28900]
  3. Domain d1clxc_: 1clx C: [28901]
  4. Domain d1clxd_: 1clx D: [28902]
2. Domains for 1e5n:
  1. Domain d1e5na_: 1e5n A: [28904]
  2. Domain d1e5nb_: 1e5n B: [28905]
3. Domain for 1xys:
  - Domain d1xys__: 1xys - [28903]
    CASP1
Streptomyces halstedii [TaxId:1944] [102070] (1 PDB entry)
- Domain for 1nq6:
  - Domain d1nq6a_: 1nq6 A: [92046]
Streptomyces lividans [TaxId:1916] [51515] (9 PDB entries)
1. Domain for 1e0v:
  - Domain d1e0va_: 1e0v A: [59149]
2. Domain for 1e0w:
  - Domain d1e0wa_: 1e0w A: [59150]
3. Domains for 1e0x:
  1. Domain d1e0xa_: 1e0x A: [59151]
  2. Domain d1e0xb_: 1e0x B: [59152]
4. Domain for 1od8:
  - Domain d1od8a_: 1od8 A: [86838]
5. Domain for 1v0k:
  - Domain d1v0ka_: 1v0k A: [108206]
6. Domain for 1v0l:
  - Domain d1v0la_: 1v0l A: [108207]
7. Domain for 1v0m:
  - Domain d1v0ma_: 1v0m A: [108208]
8. Domain for 1v0n:
  - Domain d1v0na_: 1v0n A: [108209]
9. Domain for 1xas:
  - Domain d1xas__: 1xas - [28891]
    CA-atoms only
Streptomyces olivaceoviridis [TaxId:1921] [51519] (12 PDB entries)
N-terminal domain; fused with a ricin A-like beta-trefoil domain
1. Domains for 1isv:
  1. Domain d1isva2: 1isv A:1-303 [66342]
    Other proteins in same PDB: d1isva1, d1isvb1
  2. Domain d1isvb2: 1isv B:501-803 [66344]
    Other proteins in same PDB: d1isva1, d1isvb1
2. Domains for 1isw:
  1. Domain d1iswa2: 1isw A:1-303 [66346]
    Other proteins in same PDB: d1iswa1, d1iswb1
  2. Domain d1iswb2: 1isw B:501-803 [66348]
    Other proteins in same PDB: d1iswa1, d1iswb1
3. Domains for 1isx:
  1. Domain d1isxa2: 1isx A:1-303 [66350]
    Other proteins in same PDB: d1isxa1, d1isxb1
  2. Domain d1isxb2: 1isx B:501-803 [66352]
    Other proteins in same PDB: d1isxa1, d1isxb1
4. Domains for 1isy:
  1. Domain d1isya2: 1isy A:1-303 [66354]
    Other proteins in same PDB: d1isya1, d1isyb1
  2. Domain d1isyb2: 1isy B:501-803 [66356]
    Other proteins in same PDB: d1isya1, d1isyb1
5. Domains for 1isz:
  1. Domain d1isza2: 1isz A:1-303 [66358]
    Other proteins in same PDB: d1isza1, d1iszb1
  2. Domain d1iszb2: 1isz B:501-803 [66360]
    Other proteins in same PDB: d1isza1, d1iszb1
6. Domains for 1it0:
  1. Domain d1it0a2: 1it0 A:1-303 [66362]
    Other proteins in same PDB: d1it0a1, d1it0b1
  2. Domain d1it0b2: 1it0 B:501-803 [66364]
    Other proteins in same PDB: d1it0a1, d1it0b1
7. Domains for 1v6u:
  1. Domain d1v6ua2: 1v6u A:1-303 [100427]
    Other proteins in same PDB: d1v6ua1, d1v6ub1
  2. Domain d1v6ub2: 1v6u B:501-803 [100429]
    Other proteins in same PDB: d1v6ua1, d1v6ub1
8. Domains for 1v6v:
  1. Domain d1v6va2: 1v6v A:1-303 [100431]
    Other proteins in same PDB: d1v6va1, d1v6vb1
  2. Domain d1v6vb2: 1v6v B:501-803 [100433]
    Other proteins in same PDB: d1v6va1, d1v6vb1
9. Domains for 1v6w:
  1. Domain d1v6wa2: 1v6w A:1-303 [100435]
    Other proteins in same PDB: d1v6wa1, d1v6wb1
  2. Domain d1v6wb2: 1v6w B:501-803 [100437]
    Other proteins in same PDB: d1v6wa1, d1v6wb1
10. Domains for 1v6x:
  1. Domain d1v6xa2: 1v6x A:1-303 [100439]
    Other proteins in same PDB: d1v6xa1, d1v6xb1
  2. Domain d1v6xb2: 1v6x B:501-803 [100441]
    Other proteins in same PDB: d1v6xa1, d1v6xb1
11. Domain for 1v6y:
  - Domain d1v6ya_: 1v6y A: [108401]
    Artificial chimera
12. Domains for 1xyf:
  1. Domain d1xyfa2: 1xyf A:1-303 [28909]
    Other proteins in same PDB: d1xyfa1, d1xyfb1
  2. Domain d1xyfb2: 1xyf B:501-803 [28910]
    Other proteins in same PDB: d1xyfa1, d1xyfb1
Thermoascus aurantiacus [TaxId:5087] [51518] (9 PDB entries)
1. Domain for 1gok:
  - Domain d1goka_: 1gok A: [65420]
2. Domain for 1gom:
  - Domain d1goma_: 1gom A: [65421]
3. Domain for 1goo:
  - Domain d1gooa_: 1goo A: [65422]
4. Domain for 1goq:
  - Domain d1goqa_: 1goq A: [65423]
5. Domain for 1gor:
  - Domain d1gora_: 1gor A: [65424]
6. Domain for 1i1w:
  - Domain d1i1wa_: 1i1w A: [76732]
    ultra high resolution structure
7. Domain for 1i1x:
  - Domain d1i1xa_: 1i1x A: [76733]
8. Domain for 1k6a:
  - Domain d1k6aa_: 1k6a A: [72081]
9. Domain for 1tux:
  - Domain d1tux__: 1tux - [28907]
    X-ray determined sequence differs from that in other entries

More info for Protein Xylanase A, catalytic core from c.1.8.3: beta-glycanases

Timeline for Protein Xylanase A, catalytic core from c.1.8.3: beta-glycanases:

Protein Xylanase A, catalytic core from c.1.8.3: beta-glycanases first appeared (with stable ids) in SCOP 1.55
Protein Xylanase A, catalytic core from c.1.8.3: beta-glycanases appears in SCOP 1.67
Protein Xylanase A, catalytic core from c.1.8.3: beta-glycanases appears in SCOP 1.71
Protein Xylanase A, catalytic core from c.1.8.3: beta-glycanases appears in the current release, SCOPe 2.08