Lineage for Family c.1.8.3: beta-glycanases

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 681098Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 682152Superfamily c.1.8: (Trans)glycosidases [51445] (14 families) (S)
  5. 682589Family c.1.8.3: beta-glycanases [51487] (24 proteins)
    consist of a number of sequence families

Proteins:

  1. 682590Alkaline cellulase K catalytic domain [63906] (1 species)
  2. 682594Alpha-L-arabinofuranosidase, catalytic domain [102075] (2 species)
    glycosyl hydrolase family 51
    1. 682595Species Bacillus stearothermophilus [TaxId:1422] [102076] (4 PDB entries)
    2. 682604Species Clostridium thermocellum [TaxId:1515] [141779] (2 PDB entries)
  3. 682617Beta-1,4-galactanase [89469] (4 species)
    1. 682618Species Bacillus licheniformis [TaxId:1402] [117367] (4 PDB entries)
    2. 682627Species Fungus (Aspergillus aculeatus) [TaxId:5053] [89470] (2 PDB entries)
    3. 682630Species Humicola insolens [TaxId:34413] [89472] (1 PDB entry)
    4. 682632Species Myceliophthora thermophila (Thielavia heterothallica) [TaxId:78579] [89471] (2 PDB entries)
      Myceliophthora thermophila is the anamorph name whilst Thielavia heterothallica is the teleomorph name
  4. 682641Beta-D-xylosidase, catalytic domain [102077] (2 species)
    glycosyl hydrolase family 39
    1. 682642Species Bacillus stearothermophilus [TaxId:1422] [141780] (3 PDB entries)
    2. 682667Species Thermoanaerobacterium saccharolyticum [TaxId:28896] [102078] (2 PDB entries)
  5. 682674beta-Galactosidase, domain 3 [51510] (2 species)
    1. 682675Species Arthrobacter sp. c2-2 [TaxId:192168] [141778] (1 PDB entry)
    2. 682682Species Escherichia coli [TaxId:562] [51511] (25 PDB entries)
  6. 682815beta-Glucuronidase, domain 3 [51512] (1 species)
  7. 682819Beta-mannanase [51502] (4 species)
    1. 682820Species Bacillus sp. JAMB-602 [TaxId:244966] [141775] (1 PDB entry)
      contains additional C-terminal domain (CBM)
    2. 682822Species Thermomonospora fusca [TaxId:2021] [51503] (3 PDB entries)
    3. 682826Species Tomato (Lycopersicon esculentum) [TaxId:4081] [141774] (1 PDB entry)
    4. 682828Species Trichoderma reesei [TaxId:51453] [51504] (5 PDB entries)
  8. 682834endo-1,4-beta-mannosidase [141781] (1 species)
  9. 682837Endocellulase E1 [51497] (1 species)
  10. 682843Endocellulase EngI [75066] (1 species)
  11. 682849Endoglucanase Cel5a [51499] (4 species)
    1. 682850Species Bacillus agaradhaerens [TaxId:76935] [51500] (19 PDB entries)
    2. 682870Species Bacillus subtilis [TaxId:1423] [75068] (1 PDB entry)
    3. 682872Species Erwinia chrysanthemi [TaxId:556] [51501] (1 PDB entry)
    4. 682876Species Pseudoalteromonas haloplanktis [TaxId:228] [141773] (2 PDB entries)
  12. 682881Endoglucanase CelA [51491] (1 species)
  13. 682884Endoglucanase CelC [51493] (1 species)
  14. 682889Endoglucanase H N-terminal domain [141783] (1 species)
  15. 682894Endoglucanase homologue TM1752 [102066] (1 species)
  16. 682897Exo-beta-(1,3)-glucanase [51495] (2 species)
    1. 682898Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [102065] (1 PDB entry)
    2. 682901Species Yeast (Candida albicans) [TaxId:5476] [51496] (4 PDB entries)
  17. 682906Exomannosidase [102068] (1 species)
    mannosyl-oligosaccharide glucosidase
  18. 682910Glucosylceramidase, catalytic domain [89473] (1 species)
    acid-beta-glucosidase; glycosyl hydrolase family 30; contains additional beta-domain similar to one found in alpha amylases
  19. 682932Glycosyl hydrolase family 5 xylanase, catalytic domain [102073] (1 species)
    overall domain organization is similar to the homologous glucosylceramidase
  20. 682935Mannanase A, ManA [63908] (2 species)
    1. 682936Species Cellulomonas fimi [TaxId:1708] [141776] (2 PDB entries)
    2. 682940Species Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId:155077] [63909] (5 PDB entries)
  21. 682947Plant beta-glucanases [51507] (3 species)
    1. 682948Species Banana (Musa acuminata), 1,3-beta-glucanase [TaxId:4641] [141777] (1 PDB entry)
    2. 682950Species Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId:4513] [51509] (2 PDB entries)
    3. 682954Species Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId:4513] [51508] (1 PDB entry)
  22. 682957Xylanase [51488] (6 species)
    1. 682958Species Bacillus stearothermophilus, Ixt6 [TaxId:1422] [102063] (1 PDB entry)
      intra-cellular xylanase
    2. 682961Species Bacillus stearothermophilus, Xt6 [TaxId:1422] [69386] (4 PDB entries)
    3. 682966Species Cellvibrio mixtus [TaxId:39650] [102064] (4 PDB entries)
    4. 682971Species Clostridium thermocellum, XynZ [TaxId:1515] [51489] (1 PDB entry)
      belongs to family F
    5. 682974Species Penicillium simplicissimum [TaxId:69488] [51490] (1 PDB entry)
      belongs to family 10
    6. 682976Species Thermotoga maritima [TaxId:2336] [141772] (2 PDB entries)
  23. 682981Xylanase 10c [102071] (1 species)
    Endo-beta-1,4-xylanase
  24. 682985Xylanase A, catalytic core [51514] (8 species)
    1. 682986Species Cellulomonas fimi [TaxId:1708] [51520] (9 PDB entries)
      synonym: beta-1,4-glycanase Cex
    2. 682996Species Emericella nidulans (Aspergillus nidulans) [TaxId:162425] [110350] (1 PDB entry)
    3. 682998Species Penicillium simplicissimum [TaxId:69488] [51516] (7 PDB entries)
    4. 683006Species Pseudomonas fluorescens [TaxId:294] [51517] (7 PDB entries)
    5. 683023Species Streptomyces halstedii [TaxId:1944] [102070] (1 PDB entry)
    6. 683025Species Streptomyces lividans [TaxId:1916] [51515] (9 PDB entries)
    7. 683036Species Streptomyces olivaceoviridis [TaxId:1921] [51519] (12 PDB entries)
      N-terminal domain; fused with a ricin A-like beta-trefoil domain
    8. 683060Species Thermoascus aurantiacus [TaxId:5087] [51518] (10 PDB entries)

More info for Family c.1.8.3: beta-glycanases

Timeline for Family c.1.8.3: beta-glycanases: