SCOP 1.73: Protein: Bacterial beta-amylase

Lineage for Protein: Bacterial beta-amylase

Root: SCOP 1.73
Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (14 families)

Family c.1.8.1: Amylase, catalytic domain [51446] (24 proteins)
members of the family may contain various insert subdomains
in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

Protein Bacterial beta-amylase [51485] (1 species)
protein contains additional starch-binding domain

Species:

Bacillus cereus [TaxId:1396] [51486] (14 PDB entries)
1. Domain for 1b90:
  - Domain d1b90a2: 1b90 A:1-417 [28803]
    Other proteins in same PDB: d1b90a1
    complexed with act, ca, so4
2. Domain for 1b9z:
  - Domain d1b9za2: 1b9z A:1-417 [28798]
    Other proteins in same PDB: d1b9za1
    complexed with act, ca, mal, so4
3. Domain for 1itc:
  - Domain d1itca2: 1itc A:1-417 [83706]
    Other proteins in same PDB: d1itca1
    complexed with acy, ca, glc, so4; mutant
4. Domains for 1j0y:
  1. Domain d1j0ya2: 1j0y A:1-417 [83917]
    Other proteins in same PDB: d1j0ya1, d1j0yb1, d1j0yc1, d1j0yd1
  2. Domain d1j0yb2: 1j0y B:1-417 [83919]
    Other proteins in same PDB: d1j0ya1, d1j0yb1, d1j0yc1, d1j0yd1
  3. Domain d1j0yc2: 1j0y C:1-417 [83921]
    Other proteins in same PDB: d1j0ya1, d1j0yb1, d1j0yc1, d1j0yd1
  4. Domain d1j0yd2: 1j0y D:1-417 [83923]
    Other proteins in same PDB: d1j0ya1, d1j0yb1, d1j0yc1, d1j0yd1
    complexed with ca, glc
5. Domains for 1j0z:
  1. Domain d1j0za2: 1j0z A:1-417 [83925]
    Other proteins in same PDB: d1j0za1, d1j0zb1, d1j0zc1, d1j0zd1
  2. Domain d1j0zb2: 1j0z B:1-417 [83927]
    Other proteins in same PDB: d1j0za1, d1j0zb1, d1j0zc1, d1j0zd1
  3. Domain d1j0zc2: 1j0z C:1-417 [83929]
    Other proteins in same PDB: d1j0za1, d1j0zb1, d1j0zc1, d1j0zd1
  4. Domain d1j0zd2: 1j0z D:1-417 [83931]
    Other proteins in same PDB: d1j0za1, d1j0zb1, d1j0zc1, d1j0zd1
    complexed with ca, glc
6. Domains for 1j10:
  1. Domain d1j10a2: 1j10 A:1-417 [83933]
    Other proteins in same PDB: d1j10a1, d1j10b1, d1j10c1, d1j10d1
  2. Domain d1j10b2: 1j10 B:1-417 [83935]
    Other proteins in same PDB: d1j10a1, d1j10b1, d1j10c1, d1j10d1
  3. Domain d1j10c2: 1j10 C:1-417 [83937]
    Other proteins in same PDB: d1j10a1, d1j10b1, d1j10c1, d1j10d1
  4. Domain d1j10d2: 1j10 D:1-417 [83939]
    Other proteins in same PDB: d1j10a1, d1j10b1, d1j10c1, d1j10d1
    complexed with ca, glc, xys
7. Domains for 1j11:
  1. Domain d1j11a2: 1j11 A:1-417 [83941]
    Other proteins in same PDB: d1j11a1, d1j11b1, d1j11c1, d1j11d1
  2. Domain d1j11b2: 1j11 B:1-417 [83943]
    Other proteins in same PDB: d1j11a1, d1j11b1, d1j11c1, d1j11d1
  3. Domain d1j11c2: 1j11 C:1-417 [83945]
    Other proteins in same PDB: d1j11a1, d1j11b1, d1j11c1, d1j11d1
  4. Domain d1j11d2: 1j11 D:1-417 [83947]
    Other proteins in same PDB: d1j11a1, d1j11b1, d1j11c1, d1j11d1
    complexed with ca, epg
8. Domains for 1j12:
  1. Domain d1j12a2: 1j12 A:1-417 [83949]
    Other proteins in same PDB: d1j12a1, d1j12b1, d1j12c1, d1j12d1
  2. Domain d1j12b2: 1j12 B:1-417 [83951]
    Other proteins in same PDB: d1j12a1, d1j12b1, d1j12c1, d1j12d1
  3. Domain d1j12c2: 1j12 C:1-417 [83953]
    Other proteins in same PDB: d1j12a1, d1j12b1, d1j12c1, d1j12d1
  4. Domain d1j12d2: 1j12 D:1-417 [83955]
    Other proteins in same PDB: d1j12a1, d1j12b1, d1j12c1, d1j12d1
    complexed with ca, ebg
9. Domain for 1j18:
  - Domain d1j18a2: 1j18 A:1-417 [83957]
    Other proteins in same PDB: d1j18a1
    complexed with acy, ca, glc, so4
10. Domain for 1vem:
  - Domain d1vema2: 1vem A:1-417 [120022]
    Other proteins in same PDB: d1vema1
    automatically matched to d1b90a2
    complexed with ca, glc
11. Domain for 1ven:
  - Domain d1vena2: 1ven A:1-417 [120024]
    Other proteins in same PDB: d1vena1
    automatically matched to d1b90a2
    complexed with ca, glc; mutant
12. Domain for 1veo:
  - Domain d1veoa2: 1veo A:1-417 [120026]
    Other proteins in same PDB: d1veoa1
    automatically matched to d1b90a2
    complexed with ca, glc; mutant
13. Domain for 1vep:
  - Domain d1vepa2: 1vep A:1-417 [120028]
    Other proteins in same PDB: d1vepa1
    automatically matched to d1b90a2
    complexed with ca, glc; mutant
14. Domains for 5bca:
  1. Domain d5bcaa2: 5bca A:1-417 [28799]
    Other proteins in same PDB: d5bcaa1, d5bcab1, d5bcac1, d5bcad1
  2. Domain d5bcab2: 5bca B:1-417 [28800]
    Other proteins in same PDB: d5bcaa1, d5bcab1, d5bcac1, d5bcad1
  3. Domain d5bcac2: 5bca C:1-417 [28801]
    Other proteins in same PDB: d5bcaa1, d5bcab1, d5bcac1, d5bcad1
  4. Domain d5bcad2: 5bca D:1-417 [28802]
    Other proteins in same PDB: d5bcaa1, d5bcab1, d5bcac1, d5bcad1
    complexed with ca

More info for Protein Bacterial beta-amylase from c.1.8.1: Amylase, catalytic domain

Timeline for Protein Bacterial beta-amylase from c.1.8.1: Amylase, catalytic domain:

Protein Bacterial beta-amylase from c.1.8.1: Amylase, catalytic domain first appeared (with stable ids) in SCOP 1.55, called Protein Bacterial beta-amylase, catalytic domain from c.1.8.2: beta-Amylase
Protein Bacterial beta-amylase from c.1.8.1: Amylase, catalytic domain appears in SCOP 1.71
Protein Bacterial beta-amylase from c.1.8.1: Amylase, catalytic domain appears in SCOP 1.75
Protein Bacterial beta-amylase from c.1.8.1: Amylase, catalytic domain appears in the current release, SCOPe 2.08