Lineage for Protein: Plant alpha-amylase

  1. Root: SCOP 1.65
  2. 305035Class c: Alpha and beta proteins (a/b) [51349] (121 folds)
  3. 305036Fold c.1: TIM beta/alpha-barrel [51350] (26 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 305661Superfamily c.1.8: (Trans)glycosidases [51445] (9 families) (S)
  5. 305662Family c.1.8.1: Amylase, catalytic domain [51446] (22 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 305948Protein Plant alpha-amylase [51474] (2 species)

Species:

  1. 305949Barley (Hordeum vulgare), AMY1 isozyme [TaxId:4513] [89465] (1 PDB entry)
  2. 305951Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId:4513] [51475] (3 PDB entries)
    1. Domain for 1amy:
    2. Domains for 1ava:
      1. 305952Domain d1avaa2: 1ava A:1-346 [28784]
        Other proteins in same PDB: d1avaa1, d1avab1, d1avac_, d1avad_
      2. 305953Domain d1avab2: 1ava B:1-346 [28785]
        Other proteins in same PDB: d1avaa1, d1avab1, d1avac_, d1avad_
        complexed with ca
    3. Domain for 1bg9:

More info for Protein Plant alpha-amylase from c.1.8.1: Amylase, catalytic domain

Timeline for Protein Plant alpha-amylase from c.1.8.1: Amylase, catalytic domain: