SCOP 1.65: Protein: Maltogenic amylase, central domain

Lineage for Protein: Maltogenic amylase, central domain

Root: SCOP 1.65
Class c: Alpha and beta proteins (a/b) [51349] (121 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (26 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (9 families)

Family c.1.8.1: Amylase, catalytic domain [51446] (22 proteins)
members of the family may contain various insert subdomains
in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

Protein Maltogenic amylase, central domain [51465] (4 species)
contains an additional N-terminal domain

Species:

Bacillus sp., cyclomaltodextrinase [TaxId:1409] [75060] (1 PDB entry)
- Domains for 1ea9:
  1. Domain d1ea9c3: 1ea9 C:122-503 [70089]
    Other proteins in same PDB: d1ea9c1, d1ea9c2, d1ea9d1, d1ea9d2
  2. Domain d1ea9d3: 1ea9 D:122-503 [70092]
    Other proteins in same PDB: d1ea9c1, d1ea9c2, d1ea9d1, d1ea9d2
Thermoactinomyces vulgaris, TVAI [TaxId:2026] [75061] (3 PDB entries)
1. Domain for 1izj:
  - Domain d1izja3: 1izj A:123-554 [83843]
    Other proteins in same PDB: d1izja1, d1izja2
    complexed with ca; mutant
2. Domain for 1izk:
  - Domain d1izka3: 1izk A:123-554 [83846]
    Other proteins in same PDB: d1izka1, d1izka2
    complexed with ca; mutant
3. Domains for 1ji1:
  1. Domain d1ji1a3: 1ji1 A:123-554 [71668]
    Other proteins in same PDB: d1ji1a1, d1ji1a2, d1ji1b1, d1ji1b2
  2. Domain d1ji1b3: 1ji1 B:123-554 [71671]
    Other proteins in same PDB: d1ji1a1, d1ji1a2, d1ji1b1, d1ji1b2
    complexed with ca
Thermoactinomyces vulgaris, TVAII [TaxId:2026] [51467] (7 PDB entries)
1. Domains for 1bvz:
  1. Domain d1bvza3: 1bvz A:121-502 [28770]
    Other proteins in same PDB: d1bvza1, d1bvza2, d1bvzb1, d1bvzb2
  2. Domain d1bvzb3: 1bvz B:121-502 [28771]
    Other proteins in same PDB: d1bvza1, d1bvza2, d1bvzb1, d1bvzb2
2. Domains for 1g1y:
  1. Domain d1g1ya3: 1g1y A:121-502 [60212]
    Other proteins in same PDB: d1g1ya1, d1g1ya2, d1g1yb1, d1g1yb2
  2. Domain d1g1yb3: 1g1y B:121-502 [60215]
    Other proteins in same PDB: d1g1ya1, d1g1ya2, d1g1yb1, d1g1yb2
    complexed with bcd; mutant
3. Domains for 1jf5:
  1. Domain d1jf5a3: 1jf5 A:121-502 [71646]
    Other proteins in same PDB: d1jf5a1, d1jf5a2, d1jf5b1, d1jf5b2
  2. Domain d1jf5b3: 1jf5 B:121-502 [71649]
    Other proteins in same PDB: d1jf5a1, d1jf5a2, d1jf5b1, d1jf5b2
    complexed with ca; mutant
4. Domains for 1jf6:
  1. Domain d1jf6a3: 1jf6 A:121-502 [71652]
    Other proteins in same PDB: d1jf6a1, d1jf6a2, d1jf6b1, d1jf6b2
  2. Domain d1jf6b3: 1jf6 B:121-502 [71655]
    Other proteins in same PDB: d1jf6a1, d1jf6a2, d1jf6b1, d1jf6b2
    complexed with ca; mutant
5. Domains for 1ji2:
  1. Domain d1ji2a3: 1ji2 A:121-502 [71674]
    Other proteins in same PDB: d1ji2a1, d1ji2a2, d1ji2b1, d1ji2b2
  2. Domain d1ji2b3: 1ji2 B:121-502 [71677]
    Other proteins in same PDB: d1ji2a1, d1ji2a2, d1ji2b1, d1ji2b2
    complexed with ca
6. Domains for 1jib:
  1. Domain d1jiba3: 1jib A:121-502 [63071]
    Other proteins in same PDB: d1jiba1, d1jiba2, d1jibb1, d1jibb2
  2. Domain d1jibb3: 1jib B:121-502 [63074]
    Other proteins in same PDB: d1jiba1, d1jiba2, d1jibb1, d1jibb2
    complexed with mtt; mutant
7. Domains for 1jl8:
  1. Domain d1jl8a3: 1jl8 A:121-502 [63165]
    Other proteins in same PDB: d1jl8a1, d1jl8a2, d1jl8b1, d1jl8b2
  2. Domain d1jl8b3: 1jl8 B:121-502 [63168]
    Other proteins in same PDB: d1jl8a1, d1jl8a2, d1jl8b1, d1jl8b2
    complexed with bcd; mutant
Thermus sp. [TaxId:275] [51466] (2 PDB entries)
1. Domains for 1gvi:
  1. Domain d1gvia3: 1gvi A:124-505 [70606]
    Other proteins in same PDB: d1gvia1, d1gvia2, d1gvib1, d1gvib2
  2. Domain d1gvib3: 1gvi B:124-505 [70609]
    Other proteins in same PDB: d1gvia1, d1gvia2, d1gvib1, d1gvib2
    complexed with bcd
2. Domains for 1sma:
  1. Domain d1smaa3: 1sma A:124-505 [28768]
    Other proteins in same PDB: d1smaa1, d1smaa2, d1smab1, d1smab2
  2. Domain d1smab3: 1sma B:124-505 [28769]
    Other proteins in same PDB: d1smaa1, d1smaa2, d1smab1, d1smab2

More info for Protein Maltogenic amylase, central domain from c.1.8.1: Amylase, catalytic domain

Timeline for Protein Maltogenic amylase, central domain from c.1.8.1: Amylase, catalytic domain:

Protein Maltogenic amylase, central domain from c.1.8.1: Amylase, catalytic domain first appeared (with stable ids) in SCOP 1.55, called Protein Maltogenic amylase, central domain from c.1.8.1: alpha-Amylases, N-terminal domain
Protein Maltogenic amylase, central domain from c.1.8.1: Amylase, catalytic domain appears in SCOP 1.63
Protein Maltogenic amylase, central domain from c.1.8.1: Amylase, catalytic domain appears in SCOP 1.67
Protein Maltogenic amylase, central domain from c.1.8.1: Amylase, catalytic domain appears in the current release, SCOPe 2.08