Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2829819Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2829862Protein Animal alpha-amylase [51458] (3 species)
    contains Ca2+-binding subdomain, residues 100-170
  7. 2829863Species Human (Homo sapiens) [TaxId:9606] [51460] (55 PDB entries)
    Uniprot P04746 16-511 ! SQ 04746

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1b2y:
    • 2829918Domain d1b2ya2: 1b2y A:2-403 [28759]
      Other proteins in same PDB: d1b2ya1
      complexed with ca, cl, pca
      has additional subdomain(s) that are not in the common domain
  2. Domain(s) for 1bsi:
  3. Domain(s) for 1c8q:
    • 2829917Domain d1c8qa2: 1c8q A:1-403 [59088]
      Other proteins in same PDB: d1c8qa1
      complexed with ca, cl
      has additional subdomain(s) that are not in the common domain
  4. Domain(s) for 1cpu:
    • 2829898Domain d1cpua2: 1cpu A:1-403 [28758]
      Other proteins in same PDB: d1cpua1
      complexed with ca, cl, hmc, nag
      has additional subdomain(s) that are not in the common domain
  5. Domain(s) for 1hny:
  6. Domain(s) for 1jxj:
    • 2829912Domain d1jxja2: 1jxj A:1-403 [63315]
      Other proteins in same PDB: d1jxja1
      complexed with ca, cl
      has additional subdomain(s) that are not in the common domain
  7. Domain(s) for 1jxk:
    • 2829909Domain d1jxka2: 1jxk A:1-403 [63317]
      Other proteins in same PDB: d1jxka1
      complexed with ca, cl
      has additional subdomain(s) that are not in the common domain
  8. Domain(s) for 1kb3:
    • 2829906Domain d1kb3a2: 1kb3 A:1-403 [72270]
      Other proteins in same PDB: d1kb3a1
      complexed with ca, nag
      has additional subdomain(s) that are not in the common domain
  9. Domain(s) for 1kbb:
    • 2829908Domain d1kbba2: 1kbb A:1-403 [72276]
      Other proteins in same PDB: d1kbba1
      complexed with ca, cl; mutant
      has additional subdomain(s) that are not in the common domain
  10. Domain(s) for 1kbk:
    • 2829880Domain d1kbka2: 1kbk A:1-403 [72283]
      Other proteins in same PDB: d1kbka1
      complexed with ca, cl, nag; mutant
      has additional subdomain(s) that are not in the common domain
  11. Domain(s) for 1kgu:
    • 2829915Domain d1kgua2: 1kgu A:1-403 [68599]
      Other proteins in same PDB: d1kgua1
      complexed with ca
      has additional subdomain(s) that are not in the common domain
  12. Domain(s) for 1kgw:
    • 2829907Domain d1kgwa2: 1kgw A:1-403 [68601]
      Other proteins in same PDB: d1kgwa1
      complexed with ca, nag
      has additional subdomain(s) that are not in the common domain
  13. Domain(s) for 1kgx:
    • 2829900Domain d1kgxa2: 1kgx A:1-403 [68603]
      Other proteins in same PDB: d1kgxa1
      complexed with ca, nag
      has additional subdomain(s) that are not in the common domain
  14. Domain(s) for 1mfu:
    • 2829896Domain d1mfua2: 1mfu A:1-403 [79048]
      Other proteins in same PDB: d1mfua1
      complexed with ca, cl, glc, hmc; mutant
      has additional subdomain(s) that are not in the common domain
  15. Domain(s) for 1mfv:
  16. Domain(s) for 1nm9:
    • 2829902Domain d1nm9a2: 1nm9 A:1-403 [91975]
      Other proteins in same PDB: d1nm9a1
      complexed with ca, cl, glc, hmc; mutant
      has additional subdomain(s) that are not in the common domain
  17. Domain(s) for 1q4n:
    • 2829916Domain d1q4nx2: 1q4n X:1-403 [95808]
      Other proteins in same PDB: d1q4nx1
      complexed with ca, cl, tam
      has additional subdomain(s) that are not in the common domain
  18. Domain(s) for 1smd:
  19. Domain(s) for 1u2y:
    • 2829886Domain d1u2ya2: 1u2y A:1-403 [107625]
      Other proteins in same PDB: d1u2ya1
      complexed with ca, cl, gox, nag
      has additional subdomain(s) that are not in the common domain
  20. Domain(s) for 1u30:
    • 2829882Domain d1u30a2: 1u30 A:1-403 [107630]
      Other proteins in same PDB: d1u30a1
      complexed with ca, cl, gox, lag, nag
      has additional subdomain(s) that are not in the common domain
  21. Domain(s) for 1u33:
    • 2829887Domain d1u33a2: 1u33 A:1-403 [107633]
      Other proteins in same PDB: d1u33a1
      complexed with ca, cl, lm2, nag
      has additional subdomain(s) that are not in the common domain
  22. Domain(s) for 1xcw:
    • 2829894Domain d1xcwa2: 1xcw A:1-403 [115135]
      Other proteins in same PDB: d1xcwa1
      complexed with ca, cl, nag
      has additional subdomain(s) that are not in the common domain
  23. Domain(s) for 1xcx:
    • 2829881Domain d1xcxa2: 1xcx A:1-403 [115137]
      Other proteins in same PDB: d1xcxa1
      complexed with ca, cl, nag
      has additional subdomain(s) that are not in the common domain
  24. Domain(s) for 1xd0:
    • 2829889Domain d1xd0a2: 1xd0 A:1-403 [115139]
      Other proteins in same PDB: d1xd0a1
      complexed with are, ca, cl, nag
      has additional subdomain(s) that are not in the common domain
  25. Domain(s) for 1xd1:
    • 2829905Domain d1xd1a2: 1xd1 A:1-403 [115141]
      Other proteins in same PDB: d1xd1a1
      complexed with 6sa, ca, cl, nag
      has additional subdomain(s) that are not in the common domain
  26. Domain(s) for 1z32:
    • 2829877Domain d1z32x2: 1z32 X:1-408 [124395]
      Other proteins in same PDB: d1z32x1
      automated match to d1jxka2
      complexed with agl, ca, cl, glc, hmc

      has additional subdomain(s) that are not in the common domain
  27. Domain(s) for 2cpu:
    • 2829913Domain d2cpua2: 2cpu A:1-403 [63335]
      Other proteins in same PDB: d2cpua1
      complexed with ca, cl
      has additional subdomain(s) that are not in the common domain
  28. Domain(s) for 2qmk:
    • 2829914Domain d2qmka2: 2qmk A:1-403 [150885]
      Other proteins in same PDB: d2qmka1
      automated match to d1hnya2
      complexed with ca, nag, no2

      has additional subdomain(s) that are not in the common domain
  29. Domain(s) for 2qv4:
    • 2829888Domain d2qv4a2: 2qv4 A:1-403 [151385]
      Other proteins in same PDB: d2qv4a1
      automated match to d1hnya2
      complexed with ca, nag, no2, qv4

      has additional subdomain(s) that are not in the common domain
  30. Domain(s) for 3bai:
    • 2829884Domain d3baia2: 3bai A:1-403 [155031]
      Other proteins in same PDB: d3baia1
      automated match to d1hnya2
      complexed with ca, nag, no3

      has additional subdomain(s) that are not in the common domain
  31. Domain(s) for 3baj:
    • 2829903Domain d3baja2: 3baj A:1-403 [155033]
      Other proteins in same PDB: d3baja1
      automated match to d1hnya2
      complexed with are, ca, nag, no3

      has additional subdomain(s) that are not in the common domain
  32. Domain(s) for 3bak:
    • 2829883Domain d3baka2: 3bak A:1-408 [155035]
      Other proteins in same PDB: d3baka1
      automated match to d1jxka2
      complexed with ca, nag, no3; mutant

      has additional subdomain(s) that are not in the common domain
  33. Domain(s) for 3baw:
    • 2829891Domain d3bawa2: 3baw A:1-403 [155040]
      Other proteins in same PDB: d3bawa1
      automated match to d1hnya2
      complexed with azi, ca, cl, na, nag

      has additional subdomain(s) that are not in the common domain
  34. Domain(s) for 3bax:
    • 2829879Domain d3baxa2: 3bax A:1-408 [155042]
      Other proteins in same PDB: d3baxa1
      automated match to d1jxka2
      complexed with azi, ca, cl, na, nag

      has additional subdomain(s) that are not in the common domain
  35. Domain(s) for 3bay:
    • 2829895Domain d3baya2: 3bay A:1-408 [155044]
      Other proteins in same PDB: d3baya1
      automated match to d1jxka2
      complexed with are, ca, nag, no3

      has additional subdomain(s) that are not in the common domain
  36. Domain(s) for 3blk:
    • 2829893Domain d3blka1: 3blk A:1-403 [208655]
      Other proteins in same PDB: d3blka2
      automated match to d1jfha2
      complexed with ca, cl, hmc

      has additional subdomain(s) that are not in the common domain
  37. Domain(s) for 3blp:
    • 2829876Domain d3blpx1: 3blp X:1-403 [208657]
      Other proteins in same PDB: d3blpx2
      automated match to d1jfha2
      complexed with ca, cl, hmc

      has additional subdomain(s) that are not in the common domain
  38. Domain(s) for 3cpu:
    • 2829901Domain d3cpua2: 3cpu A:1-403 [63337]
      Other proteins in same PDB: d3cpua1
      complexed with ca, cl
      has additional subdomain(s) that are not in the common domain
  39. Domain(s) for 3ij7:
    • 2829899Domain d3ij7a1: 3ij7 A:1-403 [211717]
      Other proteins in same PDB: d3ij7a2
      automated match to d1hnya2
      complexed with ca, cl

      has additional subdomain(s) that are not in the common domain
  40. Domain(s) for 3ij8:
    • 2829871Domain d3ij8a1: 3ij8 A:1-403 [211719]
      Other proteins in same PDB: d3ij8a2
      automated match to d1hnya2
      complexed with b0d, b9d, ca, cl

      has additional subdomain(s) that are not in the common domain
  41. Domain(s) for 3ij9:
    • 2829885Domain d3ij9a1: 3ij9 A:1-403 [211721]
      Other proteins in same PDB: d3ij9a2
      automated match to d1hnya2
      complexed with b0d, ca, cl

      has additional subdomain(s) that are not in the common domain
  42. Domain(s) for 3old:
    • 2829890Domain d3olda1: 3old A:2-403 [214428]
      Other proteins in same PDB: d3olda2
      automated match to d1jfha2
      complexed with aci, ca, cl, mpd, nag, pca, so4

      has additional subdomain(s) that are not in the common domain
  43. Domain(s) for 3ole:
    • 2829874Domain d3olea1: 3ole A:2-403 [214430]
      Other proteins in same PDB: d3olea2
      automated match to d1jfha2
      complexed with aci, ca, cl, mpd, nag, pca, so4

      has additional subdomain(s) that are not in the common domain
  44. Domain(s) for 3olg:
    • 2829911Domain d3olga1: 3olg A:2-403 [214432]
      Other proteins in same PDB: d3olga2
      automated match to d1jfha2
      complexed with ca, cl, glc, hsd, pca, so4

      has additional subdomain(s) that are not in the common domain
  45. Domain(s) for 3oli:
    • 2829872Domain d3olia1: 3oli A:2-403 [214436]
      Other proteins in same PDB: d3olia2
      automated match to d1jfha2
      complexed with bgc, ca, cl, hsd, mpd, pca, so4

      has additional subdomain(s) that are not in the common domain
  46. Domain(s) for 4gqq:
    • 2829870Domain d4gqqa1: 4gqq A:1-403 [222090]
      Other proteins in same PDB: d4gqqa2
      automated match to d1hnya2
      complexed with 0xr, ca, cl, nag

      has additional subdomain(s) that are not in the common domain
  47. Domain(s) for 4gqr:
    • 2829867Domain d4gqra1: 4gqr A:1-403 [222092]
      Other proteins in same PDB: d4gqra2
      automated match to d1hnya2
      complexed with ca, cl, myc, nag

      has additional subdomain(s) that are not in the common domain
  48. Domain(s) for 4w93:
    • 2829873Domain d4w93a1: 4w93 A:1-403 [274977]
      Other proteins in same PDB: d4w93a2
      automated match to d1hnya2
      complexed with 3l9, ca, cl

      has additional subdomain(s) that are not in the common domain
  49. Domain(s) for 4x9y:
    • 2829866Domain d4x9ya1: 4x9y A:1-403 [269160]
      Other proteins in same PDB: d4x9ya2
      automated match to d1hnya2
      complexed with ca, cl

      has additional subdomain(s) that are not in the common domain
  50. Domain(s) for 5e0f:
    • 2829875Domain d5e0fa1: 5e0f A:1-403 [322162]
      Other proteins in same PDB: d5e0fa2
      automated match to d1hnya2
      complexed with 5j7, ca, cl

      has additional subdomain(s) that are not in the common domain
  51. Domain(s) for 5emy:
    • 2829868Domain d5emya1: 5emy A:1-403 [319260]
      Other proteins in same PDB: d5emya2
      automated match to d1hnya2
      complexed with 5qp, ca, cl

      has additional subdomain(s) that are not in the common domain
  52. Domain(s) for 5td4:
    • 2829910Domain d5td4a1: 5td4 A:1-403 [324741]
      Other proteins in same PDB: d5td4a2
      automated match to d2cpua2
      complexed with ca, cl

      has additional subdomain(s) that are not in the common domain
  53. Domain(s) for 5u3a:
    • 2829864Domain d5u3aa1: 5u3a A:1-403 [342403]
      Other proteins in same PDB: d5u3aa2
      automated match to d1hnya2
      complexed with ca, cl, nag

      has additional subdomain(s) that are not in the common domain
  54. Domain(s) for 6obx:
    • 2829869Domain d6obxa1: 6obx A:1-403 [380488]
      Other proteins in same PDB: d6obxa2
      automated match to d1hnya2
      complexed with ca, cl, mpd, nag, zxu

      has additional subdomain(s) that are not in the common domain
  55. Domain(s) for 6ocn:
    • 2829865Domain d6ocna1: 6ocn A:1-403 [380428]
      Other proteins in same PDB: d6ocna2
      automated match to d1hnya2
      complexed with ca, cl, nag, zxy

      has additional subdomain(s) that are not in the common domain

More info for Species Human (Homo sapiens) [TaxId:9606] from c.1.8.1 Animal alpha-amylase

Timeline for Species Human (Homo sapiens) [TaxId:9606] from c.1.8.1 Animal alpha-amylase: