Lineage for Protein: Animal alpha-amylase

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2434695Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2438500Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2438501Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2438543Protein Animal alpha-amylase [51458] (3 species)
    contains Ca2+-binding subdomain, residues 100-170

Species:

  1. 2438544Human (Homo sapiens) [TaxId:9606] [51460] (55 PDB entries)
    Uniprot P04746 16-511 ! SQ 04746
    1. Domain for 1b2y:
    2. Domain for 1bsi:
    3. Domain for 1c8q:
    4. Domain for 1cpu:
    5. Domain for 1hny:
    6. Domain for 1jxj:
    7. Domain for 1jxk:
    8. Domain for 1kb3:
    9. Domain for 1kbb:
    10. Domain for 1kbk:
    11. Domain for 1kgu:
    12. Domain for 1kgw:
    13. Domain for 1kgx:
    14. Domain for 1mfu:
    15. Domain for 1mfv:
    16. Domain for 1nm9:
    17. Domain for 1q4n:
    18. Domain for 1smd:
    19. Domain for 1u2y:
    20. Domain for 1u30:
    21. Domain for 1u33:
    22. Domain for 1xcw:
    23. Domain for 1xcx:
    24. Domain for 1xd0:
    25. Domain for 1xd1:
    26. Domain for 1z32:
    27. Domain for 2cpu:
    28. Domain for 2qmk:
    29. Domain for 2qv4:
    30. Domain for 3bai:
    31. Domain for 3baj:
    32. Domain for 3bak:
    33. Domain for 3baw:
    34. Domain for 3bax:
    35. Domain for 3bay:
    36. Domain for 3blk:
    37. Domain for 3blp:
    38. Domain for 3cpu:
    39. Domain for 3ij7:
    40. Domain for 3ij8:
    41. Domain for 3ij9:
    42. Domain for 3old:
    43. Domain for 3ole:
    44. Domain for 3olg:
    45. Domain for 3oli:
    46. Domain for 4gqq:
    47. Domain for 4gqr:
    48. Domain for 4w93:
    49. Domain for 4x9y:
    50. Domain for 5e0f:
    51. Domain for 5emy:
    52. Domain for 5td4:
    53. Domain for 5u3a:
    54. Domain for 6obx:
    55. Domain for 6ocn:
  2. 2438600Pig (Sus scrofa) [TaxId:9823] [51459] (13 PDB entries)
    1. Domain for 1bvn:
    2. Domain for 1dhk:
    3. Domain for 1hx0:
    4. Domain for 1jfh:
    5. Domains for 1kxq:
      1. 2438602Domain d1kxqa2: 1kxq A:1-403 [73164]
        Other proteins in same PDB: d1kxqa1, d1kxqb1, d1kxqc1, d1kxqd1, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
        complexed with ca, cl
      2. 2438603Domain d1kxqb2: 1kxq B:1-403 [73166]
        Other proteins in same PDB: d1kxqa1, d1kxqb1, d1kxqc1, d1kxqd1, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
        complexed with ca, cl
      3. 2438604Domain d1kxqc2: 1kxq C:1-403 [73168]
        Other proteins in same PDB: d1kxqa1, d1kxqb1, d1kxqc1, d1kxqd1, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
        complexed with ca, cl
      4. 2438605Domain d1kxqd2: 1kxq D:1-403 [73170]
        Other proteins in same PDB: d1kxqa1, d1kxqb1, d1kxqc1, d1kxqd1, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
        complexed with ca, cl
    6. Domains for 1kxt:
      1. 2438613Domain d1kxta2: 1kxt A:1-403 [73178]
        Other proteins in same PDB: d1kxta1, d1kxtb_, d1kxtc1, d1kxtd_, d1kxte1, d1kxtf_
        complexed with ca, cl
      2. 2438614Domain d1kxtc2: 1kxt C:1-403 [73181]
        Other proteins in same PDB: d1kxta1, d1kxtb_, d1kxtc1, d1kxtd_, d1kxte1, d1kxtf_
        complexed with ca, cl
      3. 2438615Domain d1kxte2: 1kxt E:1-403 [73184]
        Other proteins in same PDB: d1kxta1, d1kxtb_, d1kxtc1, d1kxtd_, d1kxte1, d1kxtf_
        complexed with ca, cl
    7. Domains for 1kxv:
      1. 2438606Domain d1kxva2: 1kxv A:1-403 [73187]
        Other proteins in same PDB: d1kxva1, d1kxvb1, d1kxvc_, d1kxvd_
      2. 2438607Domain d1kxvb2: 1kxv B:1-403 [73189]
        Other proteins in same PDB: d1kxva1, d1kxvb1, d1kxvc_, d1kxvd_
    8. Domain for 1ose:
    9. Domain for 1pif:
    10. Domain for 1pig:
    11. Domain for 1ppi:
    12. Domain for 1ua3:
    13. Domain for 1wo2:
  3. 2438620Yellow mealworm (Tenebrio molitor), larva [TaxId:7067] [51461] (4 PDB entries)
    1. Domain for 1clv:
    2. Domain for 1jae:
    3. Domain for 1tmq:
    4. Domain for 1viw:

More info for Protein Animal alpha-amylase from c.1.8.1: Amylase, catalytic domain

Timeline for Protein Animal alpha-amylase from c.1.8.1: Amylase, catalytic domain: