Lineage for Species: Trypanosoma brucei

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 383642Fold c.1: TIM beta/alpha-barrel [51350] (28 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 384215Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 384216Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins)
  6. 384244Protein Eukaryotic ornithine decarboxylase [51423] (3 species)
  7. 384250Species Trypanosoma brucei [TaxId:5691] [51426] (4 PDB entries)

PDB entries in Species: Trypanosoma brucei:

  1. Domain(s) for 1f3t:
    1. 384255Domain d1f3ta2: 1f3t A:44-283 [28655]
      Other proteins in same PDB: d1f3ta1, d1f3tb1, d1f3tc1, d1f3td1
    2. 384256Domain d1f3tb2: 1f3t B:44-283 [28656]
      Other proteins in same PDB: d1f3ta1, d1f3tb1, d1f3tc1, d1f3td1
    3. 384257Domain d1f3tc2: 1f3t C:44-283 [28657]
      Other proteins in same PDB: d1f3ta1, d1f3tb1, d1f3tc1, d1f3td1
    4. 384258Domain d1f3td2: 1f3t D:44-283 [28658]
      Other proteins in same PDB: d1f3ta1, d1f3tb1, d1f3tc1, d1f3td1
      complexed with plp, put
  2. Domain(s) for 1njj:
    1. 384259Domain d1njja2: 1njj A:44-283 [91906]
      Other proteins in same PDB: d1njja1, d1njjb1, d1njjc1, d1njjd1
    2. 384260Domain d1njjb2: 1njj B:44-283 [91908]
      Other proteins in same PDB: d1njja1, d1njjb1, d1njjc1, d1njjd1
    3. 384261Domain d1njjc2: 1njj C:44-283 [91910]
      Other proteins in same PDB: d1njja1, d1njjb1, d1njjc1, d1njjd1
    4. 384262Domain d1njjd2: 1njj D:44-283 [91912]
      Other proteins in same PDB: d1njja1, d1njjb1, d1njjc1, d1njjd1
      complexed with get, orx
  3. Domain(s) for 1qu4:
    1. 384263Domain d1qu4a2: 1qu4 A:44-283 [28659]
      Other proteins in same PDB: d1qu4a1, d1qu4b1, d1qu4c1, d1qu4d1
    2. 384264Domain d1qu4b2: 1qu4 B:44-283 [28660]
      Other proteins in same PDB: d1qu4a1, d1qu4b1, d1qu4c1, d1qu4d1
    3. 384265Domain d1qu4c2: 1qu4 C:44-283 [28661]
      Other proteins in same PDB: d1qu4a1, d1qu4b1, d1qu4c1, d1qu4d1
    4. 384266Domain d1qu4d2: 1qu4 D:44-283 [28662]
      Other proteins in same PDB: d1qu4a1, d1qu4b1, d1qu4c1, d1qu4d1
  4. Domain(s) for 2tod:
    1. 384251Domain d2toda2: 2tod A:44-283 [28651]
      Other proteins in same PDB: d2toda1, d2todb1, d2todc1, d2todd1
    2. 384252Domain d2todb2: 2tod B:44-283 [28652]
      Other proteins in same PDB: d2toda1, d2todb1, d2todc1, d2todd1
    3. 384253Domain d2todc2: 2tod C:44-283 [28653]
      Other proteins in same PDB: d2toda1, d2todb1, d2todc1, d2todd1
    4. 384254Domain d2todd2: 2tod D:44-283 [28654]
      Other proteins in same PDB: d2toda1, d2todb1, d2todc1, d2todd1

More info for Species Trypanosoma brucei [TaxId:5691] from c.1.6.1 Eukaryotic ornithine decarboxylase

Timeline for Species Trypanosoma brucei [TaxId:5691] from c.1.6.1 Eukaryotic ornithine decarboxylase: