Lineage for Protein: Eukaryotic ornithine decarboxylase

  1. Root: SCOP 1.65
  2. 305035Class c: Alpha and beta proteins (a/b) [51349] (121 folds)
  3. 305036Fold c.1: TIM beta/alpha-barrel [51350] (26 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 305533Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 305534Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins)
  6. 305557Protein Eukaryotic ornithine decarboxylase [51423] (3 species)

Species:

  1. 305558Human (Homo sapiens) [TaxId:9606] [51424] (1 PDB entry)
  2. 305561Mouse (Mus musculus) [TaxId:10090] [51425] (1 PDB entry)
  3. 305563Trypanosoma brucei [TaxId:5691] [51426] (3 PDB entries)
    1. Domains for 1f3t:
      1. 305568Domain d1f3ta2: 1f3t A:44-283 [28655]
        Other proteins in same PDB: d1f3ta1, d1f3tb1, d1f3tc1, d1f3td1
      2. 305569Domain d1f3tb2: 1f3t B:44-283 [28656]
        Other proteins in same PDB: d1f3ta1, d1f3tb1, d1f3tc1, d1f3td1
      3. 305570Domain d1f3tc2: 1f3t C:44-283 [28657]
        Other proteins in same PDB: d1f3ta1, d1f3tb1, d1f3tc1, d1f3td1
      4. 305571Domain d1f3td2: 1f3t D:44-283 [28658]
        Other proteins in same PDB: d1f3ta1, d1f3tb1, d1f3tc1, d1f3td1
        complexed with plp, put
    2. Domains for 1qu4:
      1. 305572Domain d1qu4a2: 1qu4 A:44-283 [28659]
        Other proteins in same PDB: d1qu4a1, d1qu4b1, d1qu4c1, d1qu4d1
      2. 305573Domain d1qu4b2: 1qu4 B:44-283 [28660]
        Other proteins in same PDB: d1qu4a1, d1qu4b1, d1qu4c1, d1qu4d1
      3. 305574Domain d1qu4c2: 1qu4 C:44-283 [28661]
        Other proteins in same PDB: d1qu4a1, d1qu4b1, d1qu4c1, d1qu4d1
      4. 305575Domain d1qu4d2: 1qu4 D:44-283 [28662]
        Other proteins in same PDB: d1qu4a1, d1qu4b1, d1qu4c1, d1qu4d1
    3. Domains for 2tod:
      1. 305564Domain d2toda2: 2tod A:44-283 [28651]
        Other proteins in same PDB: d2toda1, d2todb1, d2todc1, d2todd1
      2. 305565Domain d2todb2: 2tod B:44-283 [28652]
        Other proteins in same PDB: d2toda1, d2todb1, d2todc1, d2todd1
      3. 305566Domain d2todc2: 2tod C:44-283 [28653]
        Other proteins in same PDB: d2toda1, d2todb1, d2todc1, d2todd1
      4. 305567Domain d2todd2: 2tod D:44-283 [28654]
        Other proteins in same PDB: d2toda1, d2todb1, d2todc1, d2todd1

More info for Protein Eukaryotic ornithine decarboxylase from c.1.6.1: Alanine racemase-like, N-terminal domain

Timeline for Protein Eukaryotic ornithine decarboxylase from c.1.6.1: Alanine racemase-like, N-terminal domain: