Lineage for Protein: Alanine racemase

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2080829Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 2080830Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (4 protein domains)
  6. 2080831Protein Alanine racemase [51421] (3 species)

Species:

  1. 2080832Bacillus stearothermophilus [TaxId:1422] [51422] (8 PDB entries)
    1. Domains for 1bd0:
      1. 2080833Domain d1bd0a2: 1bd0 A:12-244 [28642]
        Other proteins in same PDB: d1bd0a1, d1bd0b1
        complexed with in5
      2. 2080834Domain d1bd0b2: 1bd0 B:12-244 [28643]
        Other proteins in same PDB: d1bd0a1, d1bd0b1
        complexed with in5
    2. Domains for 1epv:
      1. 2080847Domain d1epva2: 1epv A:12-244 [76147]
        Other proteins in same PDB: d1epva1, d1epvb1
        complexed with dcs
      2. 2080848Domain d1epvb2: 1epv B:12-244 [76149]
        Other proteins in same PDB: d1epva1, d1epvb1
        complexed with dcs
    3. Domains for 1ftx:
      1. 2080843Domain d1ftxa2: 1ftx A:12-244 [76192]
        Other proteins in same PDB: d1ftxa1, d1ftxb1
        complexed with epc
      2. 2080844Domain d1ftxb2: 1ftx B:12-244 [76194]
        Other proteins in same PDB: d1ftxa1, d1ftxb1
        complexed with epc
    4. Domains for 1l6f:
      1. 2080839Domain d1l6fa2: 1l6f A:12-244 [73610]
        Other proteins in same PDB: d1l6fa1, d1l6fb1
        complexed with pp3
      2. 2080840Domain d1l6fb2: 1l6f B:12-244 [73612]
        Other proteins in same PDB: d1l6fa1, d1l6fb1
        complexed with pp3
    5. Domains for 1l6g:
      1. 2080837Domain d1l6ga2: 1l6g A:12-244 [73614]
        Other proteins in same PDB: d1l6ga1, d1l6gb1
        complexed with pdd
      2. 2080838Domain d1l6gb2: 1l6g B:12-244 [73616]
        Other proteins in same PDB: d1l6ga1, d1l6gb1
        complexed with pdd
    6. Domains for 1niu:
      1. 2080845Domain d1niua2: 1niu A:12-244 [91894]
        Other proteins in same PDB: d1niua1, d1niub1
        complexed with dcs
      2. 2080846Domain d1niub2: 1niu B:12-244 [91896]
        Other proteins in same PDB: d1niua1, d1niub1
        complexed with dcs
    7. Domains for 1sft:
      1. 2080835Domain d1sfta2: 1sft A:12-244 [28644]
        Other proteins in same PDB: d1sfta1, d1sftb1
        complexed with act, plp
      2. 2080836Domain d1sftb2: 1sft B:12-244 [28645]
        Other proteins in same PDB: d1sfta1, d1sftb1
        complexed with act, plp
    8. Domains for 2sfp:
      1. 2080841Domain d2sfpa2: 2sfp A:12-244 [28646]
        Other proteins in same PDB: d2sfpa1, d2sfpb1
        complexed with plp, ppi
      2. 2080842Domain d2sfpb2: 2sfp B:12-244 [28647]
        Other proteins in same PDB: d2sfpa1, d2sfpb1
        complexed with plp, ppi
  2. 2080849Pseudomonas aeruginosa [TaxId:287] [110345] (1 PDB entry)
    Uniprot Q9HTQ2
  3. 2080851Streptomyces lavendulae [TaxId:1914] [110346] (3 PDB entries)
    Uniprot Q65YW7
    1. Domain for 1vfh:
    2. Domains for 1vfs:
      1. 2080852Domain d1vfsa2: 1vfs A:13-249 [108585]
        Other proteins in same PDB: d1vfsa1, d1vfsa3, d1vfsb1, d1vfsb3
        complexed with cl, dcs
      2. 2080853Domain d1vfsb2: 1vfs B:1013-1249 [108587]
        Other proteins in same PDB: d1vfsa1, d1vfsa3, d1vfsb1, d1vfsb3
        complexed with cl, dcs
    3. Domains for 1vft:
      1. 2080855Domain d1vfta2: 1vft A:13-249 [108589]
        Other proteins in same PDB: d1vfta3, d1vfta4, d1vftb1, d1vftb3
        complexed with cl, dcs
      2. 2080856Domain d1vftb2: 1vft B:1013-1249 [108591]
        Other proteins in same PDB: d1vfta3, d1vfta4, d1vftb1, d1vftb3
        complexed with cl, dcs

More info for Protein Alanine racemase from c.1.6.1: Alanine racemase-like, N-terminal domain

Timeline for Protein Alanine racemase from c.1.6.1: Alanine racemase-like, N-terminal domain: