Class c: Alpha and beta proteins (a/b) [51349] (141 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.6: PLP-binding barrel [51419] (2 families) circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand |
Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins) |
Alanine racemase [51421] (3 species) |
Species Bacillus stearothermophilus [TaxId:1422] [51422] (8 PDB entries) |
Species Pseudomonas aeruginosa [TaxId:287] [110345] (1 PDB entry) |
Species Streptomyces lavendulae [TaxId:1914] [110346] (3 PDB entries) |
Diaminopimelate decarboxylase LysA [89457] (3 species) most similar to eukaryotic ODC |
Species Archaeon Methanococcus jannaschii [TaxId:2190] [110347] (2 PDB entries) |
Species Escherichia coli [TaxId:562] [102048] (2 PDB entries) |
Species Mycobacterium tuberculosis [TaxId:1773] [89458] (2 PDB entries) |
Eukaryotic ornithine decarboxylase [51423] (3 species) |
Species Human (Homo sapiens) [TaxId:9606] [51424] (1 PDB entry) |
Species Mouse (Mus musculus) [TaxId:10090] [51425] (1 PDB entry) |
Species Trypanosoma brucei [TaxId:5691] [51426] (5 PDB entries) |
Timeline for Family c.1.6.1: Alanine racemase-like, N-terminal domain: