Lineage for Family c.1.6.1: Alanine racemase-like, N-terminal domain

  1. Root: SCOP 1.69
  2. 473232Class c: Alpha and beta proteins (a/b) [51349] (136 folds)
  3. 473233Fold c.1: TIM beta/alpha-barrel [51350] (31 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 473860Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 473861Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins)

Proteins:

  1. 473862Alanine racemase [51421] (3 species)
    1. 473863Species Bacillus stearothermophilus [TaxId:1422] [51422] (8 PDB entries)
    2. 473880Species Pseudomonas aeruginosa [TaxId:287] [110345] (1 PDB entry)
    3. 473882Species Streptomyces lavendulae [TaxId:1914] [110346] (3 PDB entries)
  2. 473888Diaminopimelate decarboxylase LysA [89457] (3 species)
    most similar to eukaryotic ODC
    1. 473889Species Archaeon Methanococcus jannaschii [TaxId:2190] [110347] (2 PDB entries)
    2. 473896Species Escherichia coli [TaxId:562] [102048] (2 PDB entries)
    3. 473899Species Mycobacterium tuberculosis [TaxId:1773] [89458] (2 PDB entries)
  3. 473904Eukaryotic ornithine decarboxylase [51423] (3 species)
    1. 473905Species Human (Homo sapiens) [TaxId:9606] [51424] (1 PDB entry)
    2. 473908Species Mouse (Mus musculus) [TaxId:10090] [51425] (1 PDB entry)
    3. 473910Species Trypanosoma brucei [TaxId:5691] [51426] (4 PDB entries)

More info for Family c.1.6.1: Alanine racemase-like, N-terminal domain

Timeline for Family c.1.6.1: Alanine racemase-like, N-terminal domain: