SCOPe 2.05: Species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Lineage for Species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)
Family c.1.2.3: Decarboxylase [51375] (4 proteins)
Protein Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) [51376] (7 species)
Species Methanobacterium thermoautotrophicum [TaxId:145262] [51379] (16 PDB entries)

PDB entries in Species: Methanobacterium thermoautotrophicum [TaxId: 145262]:

Domain(s) for 1dv7:
- Domain d1dv7a_: 1dv7 A: [28550]
Domain(s) for 1dvj:
1. Domain d1dvja_: 1dvj A: [28546]
  complex with 6-azaUMP
  complexed with up6
2. Domain d1dvjb_: 1dvj B: [28547]
  complex with 6-azaUMP
  complexed with up6
3. Domain d1dvjc_: 1dvj C: [28548]
  complex with 6-azaUMP
  complexed with up6
4. Domain d1dvjd_: 1dvj D: [28549]
  complex with 6-azaUMP
  complexed with up6
Domain(s) for 1kly:
- Domain d1klya_: 1kly A: [72730]
  complexed with up6; mutant
Domain(s) for 1klz:
- Domain d1klza_: 1klz A: [72731]
  complexed with cl, u; mutant
Domain(s) for 1km0:
1. Domain d1km0a_: 1km0 A: [72732]
  complexed with up6; mutant
2. Domain d1km0b_: 1km0 B: [72733]
  complexed with up6; mutant
3. Domain d1km0c_: 1km0 C: [72734]
  complexed with up6; mutant
4. Domain d1km0d_: 1km0 D: [72735]
  complexed with up6; mutant
Domain(s) for 1km1:
1. Domain d1km1a_: 1km1 A: [72736]
  complexed with up6; mutant
2. Domain d1km1b_: 1km1 B: [72737]
  complexed with up6; mutant
Domain(s) for 1km2:
- Domain d1km2a_: 1km2 A: [72738]
  complexed with up6; mutant
Domain(s) for 1km3:
- Domain d1km3a_: 1km3 A: [72739]
  complexed with up6; mutant
Domain(s) for 1km4:
- Domain d1km4a_: 1km4 A: [72740]
  complexed with u; mutant
Domain(s) for 1km5:
- Domain d1km5a_: 1km5 A: [72741]
  complexed with cl, up6; mutant
Domain(s) for 1km6:
- Domain d1km6a_: 1km6 A: [72742]
  complexed with omp; mutant
Domain(s) for 1lol:
1. Domain d1lola_: 1lol A: [74150]
  complexed with bu2, xmp
2. Domain d1lolb_: 1lol B: [74151]
  complexed with bu2, xmp
Domain(s) for 1loq:
- Domain d1loqa_: 1loq A: [74155]
  complexed with u
Domain(s) for 1lor:
- Domain d1lora_: 1lor A: [74156]
  complexed with bmp
Domain(s) for 1los:
1. Domain d1losa_: 1los A: [74157]
  complexed with up6; mutant
2. Domain d1losb_: 1los B: [74158]
  complexed with up6; mutant
3. Domain d1losc_: 1los C: [74159]
  complexed with up6; mutant
4. Domain d1losd_: 1los D: [74160]
  complexed with up6; mutant
Domain(s) for 1lp6:
1. Domain d1lp6a_: 1lp6 A: [74171]
  complexed with c5p
2. Domain d1lp6b_: 1lp6 B: [74172]
  complexed with c5p

More info for Species Methanobacterium thermoautotrophicum [TaxId:145262] from c.1.2.3 Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase)

Timeline for Species Methanobacterium thermoautotrophicum [TaxId:145262] from c.1.2.3 Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase):

Species Methanobacterium thermoautotrophicum [TaxId:145262] from c.1.2.3 Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) first appeared (with stable ids) in SCOP 1.55
Species Methanobacterium thermoautotrophicum [TaxId:145262] from c.1.2.3 Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) appears in SCOPe 2.04
Species Methanobacterium thermoautotrophicum [TaxId:145262] from c.1.2.3 Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) appears in SCOPe 2.06
Species Methanobacterium thermoautotrophicum [TaxId:145262] from c.1.2.3 Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) appears in the current release, SCOPe 2.08