Lineage for Protein: Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase)

  1. Root: SCOP 1.71
  2. 570216Class c: Alpha and beta proteins (a/b) [51349] (134 folds)
  3. 570217Fold c.1: TIM beta/alpha-barrel [51350] (32 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 570417Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (5 families) (S)
  5. 570465Family c.1.2.3: Decarboxylase [51375] (2 proteins)
  6. 570488Protein Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) [51376] (4 species)

Species:

  1. 570489Archaeon Methanobacterium thermoautotrophicum [TaxId:145262] [51379] (16 PDB entries)
    1. Domain for 1dv7:
    2. Domains for 1dvj:
      1. 570491Domain d1dvja_: 1dvj A: [28546]
      2. 570492Domain d1dvjb_: 1dvj B: [28547]
      3. 570493Domain d1dvjc_: 1dvj C: [28548]
      4. 570494Domain d1dvjd_: 1dvj D: [28549]
        complex with 6-azaUMP
        complexed with up6; mutant
    3. Domain for 1kly:
    4. Domain for 1klz:
    5. Domains for 1km0:
      1. 570505Domain d1km0a_: 1km0 A: [72732]
      2. 570506Domain d1km0b_: 1km0 B: [72733]
      3. 570507Domain d1km0c_: 1km0 C: [72734]
      4. 570508Domain d1km0d_: 1km0 D: [72735]
        complexed with up6; mutant
    6. Domains for 1km1:
      1. 570502Domain d1km1a_: 1km1 A: [72736]
      2. 570503Domain d1km1b_: 1km1 B: [72737]
        complexed with up6; mutant
    7. Domain for 1km2:
    8. Domain for 1km3:
    9. Domain for 1km4:
    10. Domain for 1km5:
    11. Domain for 1km6:
    12. Domains for 1lol:
      1. 570510Domain d1lola_: 1lol A: [74150]
      2. 570511Domain d1lolb_: 1lol B: [74151]
        complexed with bu2, xmp
    13. Domain for 1loq:
    14. Domain for 1lor:
    15. Domains for 1los:
      1. 570514Domain d1losa_: 1los A: [74157]
      2. 570515Domain d1losb_: 1los B: [74158]
      3. 570516Domain d1losc_: 1los C: [74159]
      4. 570517Domain d1losd_: 1los D: [74160]
        complexed with up6; mutant
    16. Domains for 1lp6:
      1. 570512Domain d1lp6a_: 1lp6 A: [74171]
      2. 570513Domain d1lp6b_: 1lp6 B: [74172]
        complexed with c5p
  2. 570518Bacillus subtilis [TaxId:1423] [51377] (1 PDB entry)
  3. 570522Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51380] (2 PDB entries)
    1. Domains for 1dqw:
      1. 570523Domain d1dqwa_: 1dqw A: [28551]
      2. 570524Domain d1dqwb_: 1dqw B: [28552]
      3. 570525Domain d1dqwc_: 1dqw C: [28553]
      4. 570526Domain d1dqwd_: 1dqw D: [28554]
        mutant
    2. Domains for 1dqx:
      1. 570527Domain d1dqxa_: 1dqx A: [28555]
      2. 570528Domain d1dqxb_: 1dqx B: [28556]
      3. 570529Domain d1dqxc_: 1dqx C: [28557]
      4. 570530Domain d1dqxd_: 1dqx D: [28558]
        complex with 6-hydroxyuridine 5'-phosphate (BMP)
        complexed with bmp; mutant
  4. 570531Escherichia coli [TaxId:562] [51378] (3 PDB entries)
    1. Domains for 1eix:
      1. 570532Domain d1eixa_: 1eix A: [28542]
      2. 570533Domain d1eixb_: 1eix B: [28543]
      3. 570534Domain d1eixc_: 1eix C: [28544]
      4. 570535Domain d1eixd_: 1eix D: [28545]
        complexed with bmq
    2. Domains for 1jjk:
      1. 570538Domain d1jjka_: 1jjk A: [63122]
      2. 570539Domain d1jjkb_: 1jjk B: [63123]
      3. 570540Domain d1jjkc_: 1jjk C: [63124]
      4. 570541Domain d1jjkd_: 1jjk D: [63125]
      5. 570542Domain d1jjke_: 1jjk E: [63126]
      6. 570543Domain d1jjkf_: 1jjk F: [63127]
      7. 570544Domain d1jjkg_: 1jjk G: [63128]
      8. 570545Domain d1jjkh_: 1jjk H: [63129]
      9. 570546Domain d1jjki_: 1jjk I: [63130]
      10. 570547Domain d1jjkj_: 1jjk J: [63131]
      11. 570548Domain d1jjkk_: 1jjk K: [63132]
      12. 570549Domain d1jjkl_: 1jjk L: [63133]
      13. 570550Domain d1jjkm_: 1jjk M: [63134]
      14. 570551Domain d1jjkn_: 1jjk N: [63135]
      15. 570552Domain d1jjko_: 1jjk O: [63136]
      16. 570553Domain d1jjkp_: 1jjk P: [63137]
        complexed with bmp
    3. Domains for 1l2u:
      1. 570536Domain d1l2ua_: 1l2u A: [73516]
      2. 570537Domain d1l2ub_: 1l2u B: [73517]

More info for Protein Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) from c.1.2.3: Decarboxylase

Timeline for Protein Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) from c.1.2.3: Decarboxylase: