SCOP 1.69: Family c.1.2.3: Decarboxylase

Lineage for Family c.1.2.3: Decarboxylase

1. Root: SCOP 1.69

2. Class c: Alpha and beta proteins (a/b) [51349] (136 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (31 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (4 families)

5. Family c.1.2.3: Decarboxylase [51375] (2 proteins)

Proteins:

1. 3-keto-L-gulonate 6-phosphate decarboxylase [75050] (1 species)

   • Species Escherichia coli [TaxId:562] [75051] (10 PDB entries)

2. Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) [51376] (4 species)

   1. Species Archaeon Methanobacterium thermoautotrophicum [TaxId:145262] [51379] (16 PDB entries)

   2. Species Bacillus subtilis [TaxId:1423] [51377] (1 PDB entry)

   3. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51380] (2 PDB entries)

   4. Species Escherichia coli [TaxId:562] [51378] (3 PDB entries)

More info for Family c.1.2.3: Decarboxylase

Timeline for Family c.1.2.3: Decarboxylase:

• Family c.1.2.3: Decarboxylase first appeared (with stable ids) in SCOP 1.55, called Family c.1.2.3: Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase)
  
• Family c.1.2.3: Decarboxylase appears in SCOP 1.67
  
• Family c.1.2.3: Decarboxylase appears in SCOP 1.71
  
• Family c.1.2.3: Decarboxylase appears in the current release, SCOPe 2.08