Lineage for Family c.1.2.3: Decarboxylase

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2079053Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families) (S)
  5. 2079148Family c.1.2.3: Decarboxylase [51375] (4 protein domains)

Protein Domains:

  1. 20791493-keto-L-gulonate 6-phosphate decarboxylase [75050] (2 species)
    1. 2079150Species Escherichia coli [TaxId:562] [75051] (14 PDB entries)
      Uniprot P39304
    2. 2079178Species Streptococcus mutans [TaxId:1309] [188972] (3 PDB entries)
  2. 2079188Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) [51376] (7 species)
    1. 2079189Species Bacillus subtilis [TaxId:1423] [51377] (1 PDB entry)
    2. 2079193Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51380] (2 PDB entries)
    3. 2079202Species Escherichia coli [TaxId:562] [51378] (3 PDB entries)
    4. 2079225Species Methanobacterium thermoautotrophicum [TaxId:145262] [51379] (16 PDB entries)
    5. 2079254Species Plasmodium vivax [TaxId:5855] [141747] (1 PDB entry)
    6. 2079256Species Pyrococcus horikoshii [TaxId:53953] [141748] (4 PDB entries)
      Uniprot O58462 1-208
    7. 2079265Species Thermotoga maritima [TaxId:2336] [141746] (1 PDB entry)
      Uniprot Q9WYG7 1-198
  3. 2079267Protozoan orotidine monophosphate decarboxylase [141749] (5 species)
    1. 2079268Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [141751] (2 PDB entries)
      Uniprot Q8T6J6 1-323
    2. 2079273Species Plasmodium berghei [TaxId:5821] [141752] (1 PDB entry)
      Uniprot Q4Z4C3 2-325
    3. 2079275Species Plasmodium falciparum (isolate 3D7) (Plasmodium falciparum 3D7) [TaxId:36329] [159376] (5 PDB entries)
    4. 2079284Species Plasmodium vivax [TaxId:5855] [141750] (1 PDB entry)
    5. 2079286Species Plasmodium yoelii [TaxId:5861] [141753] (1 PDB entry)
      Uniprot Q7RPE4 2-322
  4. 2079288automated matches [190130] (11 species)
    not a true protein
    1. 2079289Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [188935] (5 PDB entries)
    2. 2079306Species Escherichia coli [TaxId:562] [186853] (1 PDB entry)
    3. 2079308Species Geobacillus kaustophilus [TaxId:235909] [188260] (2 PDB entries)
    4. 2079315Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [187245] (4 PDB entries)
    5. 2079324Species Methanobacterium thermoautotrophicum [TaxId:187420] [189749] (5 PDB entries)
    6. 2079335Species Methanothermobacter thermautotrophicus [TaxId:145262] [189782] (26 PDB entries)
    7. 2079379Species Methanothermobacter thermautotrophicus [TaxId:187420] [188934] (67 PDB entries)
    8. 2079544Species Plasmodium berghei [TaxId:5821] [187698] (1 PDB entry)
    9. 2079546Species Plasmodium falciparum [TaxId:36329] [187244] (5 PDB entries)
    10. 2079559Species Vibrio cholerae [TaxId:243277] [225822] (1 PDB entry)
    11. 2079562Species Vibrio cholerae [TaxId:666] [226270] (1 PDB entry)

More info for Family c.1.2.3: Decarboxylase

Timeline for Family c.1.2.3: Decarboxylase: